EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027441 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 9756 bases
Position: chr2:193373738-193383493
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0060287	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0060288	-	835	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060289	-	748	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060283	-	2318	XM_011239965	MGP_C57BL6NJ_P0060283	121 (aa)	XP_011238267	Q8BXL7
MGP_C57BL6NJ_T0060284	-	2179	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060285	-	1822	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060286	-	1087	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060287	-	733	-	MGP_C57BL6NJ_P0060287	201 (aa)	-	-
MGP_C57BL6NJ_T0060291	-	434	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060292	-	555	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060290	-	662	-	MGP_C57BL6NJ_P0060290	62 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0027441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027441	Arfrp1	93	38.793	MGP_C57BL6NJ_G0018785	Arf1	96	33.871
MGP_C57BL6NJ_G0027441	Arfrp1	91	40.000	MGP_C57BL6NJ_G0020090	Arl4a	90	34.896
MGP_C57BL6NJ_G0027441	Arfrp1	79	41.837	MGP_C57BL6NJ_G0018030	Arl1	94	33.880
MGP_C57BL6NJ_G0027441	Arfrp1	90	38.393	MGP_C57BL6NJ_G0030945	Arf5	94	34.225
MGP_C57BL6NJ_G0027441	Arfrp1	87	32.222	MGP_C57BL6NJ_G0019601	Arl4d	85	32.222
MGP_C57BL6NJ_G0027441	Arfrp1	93	37.931	MGP_C57BL6NJ_G0022719	Arf3	96	33.333
MGP_C57BL6NJ_G0027441	Arfrp1	91	38.182	MGP_C57BL6NJ_G0025163	Arl2	97	35.106
MGP_C57BL6NJ_G0027441	Arfrp1	87	35.185	MGP_C57BL6NJ_G0030405	Rab35	59	32.576
MGP_C57BL6NJ_G0027441	Arfrp1	93	38.938	MGP_C57BL6NJ_G0026151	Arl5a	97	38.587
MGP_C57BL6NJ_G0027441	Arfrp1	71	30.070	MGP_C57BL6NJ_G0016921	Arl8a	73	30.070
MGP_C57BL6NJ_G0027441	Arfrp1	93	31.304	MGP_C57BL6NJ_G0031541	Arl8b	74	31.724
MGP_C57BL6NJ_G0027441	Arfrp1	85	34.286	MGP_C57BL6NJ_G0016684	Arl4c	86	34.286
MGP_C57BL6NJ_G0027441	Arfrp1	87	37.273	MGP_C57BL6NJ_G0021842	Arl11	94	34.659
MGP_C57BL6NJ_G0027441	Arfrp1	84	40.196	MGP_C57BL6NJ_G0025781	Arl5b	92	37.126
MGP_C57BL6NJ_G0027441	Arfrp1	93	40.708	MGP_C57BL6NJ_G0019440	Arl5c	96	37.705
MGP_C57BL6NJ_G0027441	Arfrp1	84	36.538	MGP_C57BL6NJ_G0027713	Arl14	83	35.503
MGP_C57BL6NJ_G0027441	Arfrp1	92	40.000	MGP_C57BL6NJ_G0025625	Arl3	96	40.000
MGP_C57BL6NJ_G0027441	Arfrp1	93	38.793	MGP_C57BL6NJ_G0019663	Arf2	96	33.333
MGP_C57BL6NJ_G0027441	Arfrp1	93	33.929	MGP_C57BL6NJ_G0023350	Arl6	92	30.387