EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0060888	KH_1	PF00013.29	9.1e-17	1	2
MGP_C57BL6NJ_P0060888	KH_1	PF00013.29	9.1e-17	2	2
MGP_C57BL6NJ_P0060887	KH_1	PF00013.29	9.2e-17	1	2
MGP_C57BL6NJ_P0060887	KH_1	PF00013.29	9.2e-17	2	2
MGP_C57BL6NJ_P0060885	KH_1	PF00013.29	1.1e-16	1	2
MGP_C57BL6NJ_P0060885	KH_1	PF00013.29	1.1e-16	2	2
MGP_C57BL6NJ_P0060886	KH_1	PF00013.29	1.3e-16	1	2
MGP_C57BL6NJ_P0060886	KH_1	PF00013.29	1.3e-16	2	2
MGP_C57BL6NJ_P0060883	KH_1	PF00013.29	1.7e-16	1	2
MGP_C57BL6NJ_P0060883	KH_1	PF00013.29	1.7e-16	2	2
MGP_C57BL6NJ_P0060888	Agenet	PF05641.12	4.1e-15	1	2
MGP_C57BL6NJ_P0060888	Agenet	PF05641.12	4.1e-15	2	2
MGP_C57BL6NJ_P0060887	Agenet	PF05641.12	4.2e-15	1	2
MGP_C57BL6NJ_P0060887	Agenet	PF05641.12	4.2e-15	2	2
MGP_C57BL6NJ_P0060885	Agenet	PF05641.12	4.9e-15	1	2
MGP_C57BL6NJ_P0060885	Agenet	PF05641.12	4.9e-15	2	2
MGP_C57BL6NJ_P0060886	Agenet	PF05641.12	6.4e-15	1	2
MGP_C57BL6NJ_P0060886	Agenet	PF05641.12	6.4e-15	2	2
MGP_C57BL6NJ_P0060883	Agenet	PF05641.12	8.1e-15	1	2
MGP_C57BL6NJ_P0060883	Agenet	PF05641.12	8.1e-15	2	2
MGP_C57BL6NJ_P0060885	FXMRP1_C_core	PF12235.8	3.1e-46	1	1
MGP_C57BL6NJ_P0060883	FXMRP1_C_core	PF12235.8	4.2e-46	1	1
MGP_C57BL6NJ_P0060888	FXMRP1_C_core	PF12235.8	8.6e-29	1	2
MGP_C57BL6NJ_P0060888	FXMRP1_C_core	PF12235.8	8.6e-29	2	2
MGP_C57BL6NJ_P0060887	FXMRP1_C_core	PF12235.8	8.7e-29	1	2
MGP_C57BL6NJ_P0060887	FXMRP1_C_core	PF12235.8	8.7e-29	2	2
MGP_C57BL6NJ_P0060886	FXMRP1_C_core	PF12235.8	5.3e-28	1	2
MGP_C57BL6NJ_P0060886	FXMRP1_C_core	PF12235.8	5.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0060890	-	646	-	MGP_C57BL6NJ_P0060890	132 (aa)	-	-
MGP_C57BL6NJ_T0060891	-	2484	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0060883	-	2458	XM_006535400	MGP_C57BL6NJ_P0060883	677 (aa)	XP_006535463	Q61584
MGP_C57BL6NJ_T0060886	-	2128	-	MGP_C57BL6NJ_P0060886	621 (aa)	-	-
MGP_C57BL6NJ_T0060887	-	3013	-	MGP_C57BL6NJ_P0060887	539 (aa)	-	-
MGP_C57BL6NJ_T0060884	-	2157	-	MGP_C57BL6NJ_P0060884	54 (aa)	-	-
MGP_C57BL6NJ_T0060885	-	2126	-	MGP_C57BL6NJ_P0060885	568 (aa)	-	-
MGP_C57BL6NJ_T0060888	-	1611	-	MGP_C57BL6NJ_P0060888	536 (aa)	-	-
MGP_C57BL6NJ_T0060889	-	651	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027566	Fxr1	99	66.490	MGP_C57BL6NJ_G0018933	Fxr2	98	62.737
MGP_C57BL6NJ_G0027566	Fxr1	81	69.643	MGP_C57BL6NJ_G0036272	Fmr1	85	62.992