EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0027578 (Gene tree)
Gene ID
-
Gene Symbol
Exosc9
Alias
PM/Scl-75|Pmscl1|RRP45|p5|p6
Full Name
exosome component 9
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Plus strand
Length
13122 bases
Position
chr3:36001375-36014496
Accession
1355319
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0060947RNase_PHPF01138.212.6e-2211
MGP_C57BL6NJ_P0060950RNase_PHPF01138.211.6e-1311
MGP_C57BL6NJ_P0060947RNase_PH_CPF03725.152.9e-1211
MGP_C57BL6NJ_P0060952RNase_PH_CPF03725.154.2e-0911
MGP_C57BL6NJ_P0060950RNase_PH_CPF03725.151.9e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0060947-1617-MGP_C57BL6NJ_P0060947438 (aa)--
MGP_C57BL6NJ_T0060946-1227-MGP_C57BL6NJ_P0060946242 (aa)-Q9JHI7
MGP_C57BL6NJ_T0060952-515-MGP_C57BL6NJ_P0060952131 (aa)--
MGP_C57BL6NJ_T0060953-682-MGP_C57BL6NJ_P0060953111 (aa)--
MGP_C57BL6NJ_T0060950-647-MGP_C57BL6NJ_P0060950147 (aa)--
MGP_C57BL6NJ_T0060951-2479--- (aa)--
MGP_C57BL6NJ_T0060949-913--- (aa)--
MGP_C57BL6NJ_T0060948-1770--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0027578's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027578's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0027578Exosc99731.973MGP_C57BL6NJ_G0035972Exosc78231.667

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us