EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0027968 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 18232 bases
Position: chr3:98577271-98595502
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0062650	KH_1	PF00013.29	1.9e-34	1	2
MGP_C57BL6NJ_P0062650	KH_1	PF00013.29	1.9e-34	2	2
MGP_C57BL6NJ_P0062648	KH_1	PF00013.29	1.2e-33	1	2
MGP_C57BL6NJ_P0062648	KH_1	PF00013.29	1.2e-33	2	2
MGP_C57BL6NJ_P0062652	KH_1	PF00013.29	5.8e-28	1	2
MGP_C57BL6NJ_P0062652	KH_1	PF00013.29	5.8e-28	2	2
MGP_C57BL6NJ_P0062651	KH_1	PF00013.29	3e-19	1	1
MGP_C57BL6NJ_P0062651	TUDOR	PF00567.24	4.7e-29	1	1
MGP_C57BL6NJ_P0062652	TUDOR	PF00567.24	5.3e-29	1	1
MGP_C57BL6NJ_P0062648	TUDOR	PF00567.24	5.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0062651	-	2476	-	MGP_C57BL6NJ_P0062651	515 (aa)	-	-
MGP_C57BL6NJ_T0062650	-	1231	-	MGP_C57BL6NJ_P0062650	296 (aa)	-	-
MGP_C57BL6NJ_T0062648	-	1794	XM_006502138	MGP_C57BL6NJ_P0062648	560 (aa)	XP_006502201	Q80VL1
MGP_C57BL6NJ_T0062649	-	476	-	MGP_C57BL6NJ_P0062649	50 (aa)	-	-
MGP_C57BL6NJ_T0062652	-	2586	-	MGP_C57BL6NJ_P0062652	556 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0027968's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0027968	Tdrkh	74	31.707	MGP_C57BL6NJ_G0026005	Fubp3	79	31.707
MGP_C57BL6NJ_G0027968	Tdrkh	52	30.625	MGP_C57BL6NJ_G0031157	Igf2bp3	55	30.625