EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0028042 (Gene tree)
Gene ID: -
Gene Symbol: Rbm8a
Alias: 2310057C03Rik|AA673428|Rbm8
Full Name: RNA binding motif protein 8a
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 3864 bases
Position: chr3:101073556-101077419
Accession: 1913129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0063030	RRM_1	PF00076.22	5.2e-18	1	1
MGP_C57BL6NJ_P0063029	RRM_1	PF00076.22	5.6e-18	1	1
MGP_C57BL6NJ_P0063031	RRM_1	PF00076.22	5.6e-18	1	1
MGP_C57BL6NJ_P0063029	RRM_3	PF08777.11	3.7e-06	1	1
MGP_C57BL6NJ_P0063031	RRM_3	PF08777.11	3.8e-06	1	1
MGP_C57BL6NJ_P0063030	RRM_3	PF08777.11	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0063029	-	2608	-	MGP_C57BL6NJ_P0063029	173 (aa)	-	Q9CWZ3
MGP_C57BL6NJ_T0063032	-	464	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0063030	-	2757	-	MGP_C57BL6NJ_P0063030	171 (aa)	-	-
MGP_C57BL6NJ_T0063031	-	2587	-	MGP_C57BL6NJ_P0063031	174 (aa)	-	-
MGP_C57BL6NJ_T0063033	-	560	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0028042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0028042	Rbm8a	54	35.870	MGP_C57BL6NJ_G0031411	Tia1	77	35.870
MGP_C57BL6NJ_G0028042	Rbm8a	62	32.000	MGP_C57BL6NJ_G0033826	Elavl1	74	32.000
MGP_C57BL6NJ_G0028042	Rbm8a	57	31.313	MGP_C57BL6NJ_G0036247	Rbmx	73	32.000
MGP_C57BL6NJ_G0028042	Rbm8a	58	32.353	MGP_C57BL6NJ_G0028865	Elavl2	59	33.784
MGP_C57BL6NJ_G0028042	Rbm8a	62	30.693	MGP_C57BL6NJ_G0028998	Elavl4	54	33.784
MGP_C57BL6NJ_G0028042	Rbm8a	52	32.877	MGP_C57BL6NJ_G0028025	Sf3b4	50	32.877