EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0028388 (Gene tree)
Gene ID: -
Gene Symbol: Rpf1
Alias: 2210420E24Rik|2310066N05Rik|Bxdc5
Full Name: ribosome production factor 1 homolog
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 15721 bases
Position: chr3:155050726-155066446
Accession: 1917535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0064678	Brix	PF04427.18	8.3e-26	1	1
MGP_C57BL6NJ_P0064679	Brix	PF04427.18	6.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0064680	-	813	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0064681	-	807	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0064682	-	1978	-	MGP_C57BL6NJ_P0064682	212 (aa)	-	-
MGP_C57BL6NJ_T0064679	-	1120	-	MGP_C57BL6NJ_P0064679	146 (aa)	-	-
MGP_C57BL6NJ_T0064678	-	1661	XM_006502050	MGP_C57BL6NJ_P0064678	349 (aa)	XP_006502113	Q7TND5

Gene Model

Click here to download MGP_C57BL6NJ_G0028388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0028388	Rpf1	87	40.625	MGP_C57BL6NJ_G0016299	Imp4	71	37.321