EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0028466 (Gene tree)
Gene ID: -
Gene Symbol: Rad54b
Alias: E130016E03Rik
Full Name: RAD54 homolog B (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 60446 bases
Position: chr4:8640365-8700810
Accession: 3605986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0065164	ResIII	PF04851.15	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0065168	-	702	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0065162	-	2403	-	MGP_C57BL6NJ_P0065162	98 (aa)	-	-
MGP_C57BL6NJ_T0065163	-	652	-	MGP_C57BL6NJ_P0065163	93 (aa)	-	-
MGP_C57BL6NJ_T0065161	-	434	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0065167	-	801	-	MGP_C57BL6NJ_P0065167	155 (aa)	-	-
MGP_C57BL6NJ_T0065164	-	2870	-	MGP_C57BL6NJ_P0065164	886 (aa)	-	-
MGP_C57BL6NJ_T0065165	-	447	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028466's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0028466	Rad54b	76	44.604	MGP_C57BL6NJ_G0029041	Rad54l	88	44.604
MGP_C57BL6NJ_G0028466	Rad54b	66	31.229	MGP_C57BL6NJ_G0036182	Smarca1	68	31.488
MGP_C57BL6NJ_G0028466	Rad54b	56	30.528	MGP_C57BL6NJ_G0028059	Chd1l	50	30.528