EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0028757 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp3
Alias
5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1
Full Name
polypyrimidine tract binding protein 3
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
77966 bases
Position
chr4:60415054-60493019
Accession
1923334
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0066348RRM_5PF13893.61.1e-6113
MGP_C57BL6NJ_P0066348RRM_5PF13893.61.1e-6123
MGP_C57BL6NJ_P0066348RRM_5PF13893.61.1e-6133
MGP_C57BL6NJ_P0066347RRM_5PF13893.61.2e-6113
MGP_C57BL6NJ_P0066347RRM_5PF13893.61.2e-6123
MGP_C57BL6NJ_P0066347RRM_5PF13893.61.2e-6133
MGP_C57BL6NJ_P0066346RRM_5PF13893.61.2e-6113
MGP_C57BL6NJ_P0066346RRM_5PF13893.61.2e-6123
MGP_C57BL6NJ_P0066346RRM_5PF13893.61.2e-6133
MGP_C57BL6NJ_P0066350RRM_5PF13893.61.3e-4711
MGP_C57BL6NJ_P0066353RRM_5PF13893.67.2e-0611
MGP_C57BL6NJ_P0066348RRM_1PF00076.222.1e-3113
MGP_C57BL6NJ_P0066348RRM_1PF00076.222.1e-3123
MGP_C57BL6NJ_P0066348RRM_1PF00076.222.1e-3133
MGP_C57BL6NJ_P0066347RRM_1PF00076.222.2e-3113
MGP_C57BL6NJ_P0066347RRM_1PF00076.222.2e-3123
MGP_C57BL6NJ_P0066347RRM_1PF00076.222.2e-3133
MGP_C57BL6NJ_P0066346RRM_1PF00076.222.3e-3113
MGP_C57BL6NJ_P0066346RRM_1PF00076.222.3e-3123
MGP_C57BL6NJ_P0066346RRM_1PF00076.222.3e-3133
MGP_C57BL6NJ_P0066353RRM_1PF00076.222.8e-1111
MGP_C57BL6NJ_P0066350RRM_1PF00076.223.9e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0066349-669--- (aa)--
MGP_C57BL6NJ_T0066348-3409-MGP_C57BL6NJ_P0066348551 (aa)--
MGP_C57BL6NJ_T0066347-6640-MGP_C57BL6NJ_P0066347554 (aa)--
MGP_C57BL6NJ_T0066346-6683XM_006537851MGP_C57BL6NJ_P0066346556 (aa)XP_006537914Q8BHD7
MGP_C57BL6NJ_T0066354-447--- (aa)--
MGP_C57BL6NJ_T0066355-606-MGP_C57BL6NJ_P0066355104 (aa)--
MGP_C57BL6NJ_T0066350-566-MGP_C57BL6NJ_P0066350188 (aa)--
MGP_C57BL6NJ_T0066351-1286-MGP_C57BL6NJ_P006635145 (aa)--
MGP_C57BL6NJ_T0066352-558-MGP_C57BL6NJ_P006635241 (aa)--
MGP_C57BL6NJ_T0066353-550-MGP_C57BL6NJ_P0066353146 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0028757's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028757's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0028757Ptbp39178.195MGP_C57BL6NJ_G0028242Ptbp29969.835
MGP_C57BL6NJ_G0028757Ptbp38335.537MGP_C57BL6NJ_G0032411Hnrnpl5536.207
MGP_C57BL6NJ_G0028757Ptbp310077.379MGP_C57BL6NJ_G0017857Ptbp110078.136

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