EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0028865 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 156251 bases
Position: chr4:94708956-94865206
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0066761	RRM_5	PF13893.6	1.3e-12	1	2
MGP_C57BL6NJ_P0066761	RRM_5	PF13893.6	1.3e-12	2	2
MGP_C57BL6NJ_P0066763	RRM_5	PF13893.6	1.5e-12	1	2
MGP_C57BL6NJ_P0066763	RRM_5	PF13893.6	1.5e-12	2	2
MGP_C57BL6NJ_P0066762	RRM_5	PF13893.6	1.8e-12	1	2
MGP_C57BL6NJ_P0066762	RRM_5	PF13893.6	1.8e-12	2	2
MGP_C57BL6NJ_P0066760	RRM_5	PF13893.6	1.9e-12	1	2
MGP_C57BL6NJ_P0066760	RRM_5	PF13893.6	1.9e-12	2	2
MGP_C57BL6NJ_P0066766	RRM_5	PF13893.6	2.2e-12	1	2
MGP_C57BL6NJ_P0066766	RRM_5	PF13893.6	2.2e-12	2	2
MGP_C57BL6NJ_P0066765	RRM_5	PF13893.6	2.2e-12	1	2
MGP_C57BL6NJ_P0066765	RRM_5	PF13893.6	2.2e-12	2	2
MGP_C57BL6NJ_P0066761	RRM_1	PF00076.22	1.2e-66	1	3
MGP_C57BL6NJ_P0066761	RRM_1	PF00076.22	1.2e-66	2	3
MGP_C57BL6NJ_P0066761	RRM_1	PF00076.22	1.2e-66	3	3
MGP_C57BL6NJ_P0066763	RRM_1	PF00076.22	1.4e-66	1	3
MGP_C57BL6NJ_P0066763	RRM_1	PF00076.22	1.4e-66	2	3
MGP_C57BL6NJ_P0066763	RRM_1	PF00076.22	1.4e-66	3	3
MGP_C57BL6NJ_P0066762	RRM_1	PF00076.22	1.6e-66	1	3
MGP_C57BL6NJ_P0066762	RRM_1	PF00076.22	1.6e-66	2	3
MGP_C57BL6NJ_P0066762	RRM_1	PF00076.22	1.6e-66	3	3
MGP_C57BL6NJ_P0066760	RRM_1	PF00076.22	1.7e-66	1	3
MGP_C57BL6NJ_P0066760	RRM_1	PF00076.22	1.7e-66	2	3
MGP_C57BL6NJ_P0066760	RRM_1	PF00076.22	1.7e-66	3	3
MGP_C57BL6NJ_P0066765	RRM_1	PF00076.22	2e-66	1	3
MGP_C57BL6NJ_P0066765	RRM_1	PF00076.22	2e-66	2	3
MGP_C57BL6NJ_P0066765	RRM_1	PF00076.22	2e-66	3	3
MGP_C57BL6NJ_P0066766	RRM_1	PF00076.22	2e-66	1	3
MGP_C57BL6NJ_P0066766	RRM_1	PF00076.22	2e-66	2	3
MGP_C57BL6NJ_P0066766	RRM_1	PF00076.22	2e-66	3	3
MGP_C57BL6NJ_P0066768	RRM_1	PF00076.22	7.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0066761	-	3671	-	MGP_C57BL6NJ_P0066761	347 (aa)	-	-
MGP_C57BL6NJ_T0066760	-	3797	XM_006502778	MGP_C57BL6NJ_P0066760	376 (aa)	XP_006502841	Q60899
MGP_C57BL6NJ_T0066763	-	3730	-	MGP_C57BL6NJ_P0066763	360 (aa)	-	-
MGP_C57BL6NJ_T0066762	-	3840	-	MGP_C57BL6NJ_P0066762	373 (aa)	-	-
MGP_C57BL6NJ_T0066765	-	1269	-	MGP_C57BL6NJ_P0066765	388 (aa)	-	-
MGP_C57BL6NJ_T0066764	-	930	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0066767	-	3195	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0066766	-	1282	-	MGP_C57BL6NJ_P0066766	389 (aa)	-	-
MGP_C57BL6NJ_T0066769	-	408	-	MGP_C57BL6NJ_P0066769	83 (aa)	-	-
MGP_C57BL6NJ_T0066768	-	425	-	MGP_C57BL6NJ_P0066768	125 (aa)	-	-
MGP_C57BL6NJ_T0066770	-	511	-	MGP_C57BL6NJ_P0066770	23 (aa)	-	-
MGP_C57BL6NJ_T0066771	-	450	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0066772	-	415	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0028865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0028865	Elavl2	85	41.975	MGP_C57BL6NJ_G0026558	Celf1	69	41.975
MGP_C57BL6NJ_G0028865	Elavl2	60	41.558	MGP_C57BL6NJ_G0026182	Rbms1	51	37.209
MGP_C57BL6NJ_G0028865	Elavl2	61	30.000	MGP_C57BL6NJ_G0030211	Hnrnpd	70	32.000
MGP_C57BL6NJ_G0028865	Elavl2	63	32.911	MGP_C57BL6NJ_G0036039	Rbm3	66	37.500
MGP_C57BL6NJ_G0028865	Elavl2	78	40.741	MGP_C57BL6NJ_G0035394	Celf6	89	37.037
MGP_C57BL6NJ_G0028865	Elavl2	100	80.332	MGP_C57BL6NJ_G0034964	Elavl3	100	81.111
MGP_C57BL6NJ_G0028865	Elavl2	64	37.500	MGP_C57BL6NJ_G0017880	Cirbp	76	37.500
MGP_C57BL6NJ_G0028865	Elavl2	89	76.375	MGP_C57BL6NJ_G0033826	Elavl1	94	76.375
MGP_C57BL6NJ_G0028865	Elavl2	59	33.784	MGP_C57BL6NJ_G0028042	Rbm8a	58	32.353
MGP_C57BL6NJ_G0028865	Elavl2	88	39.506	MGP_C57BL6NJ_G0024616	Celf4	91	37.037
MGP_C57BL6NJ_G0028865	Elavl2	97	30.857	MGP_C57BL6NJ_G0017954	Celf5	97	30.857
MGP_C57BL6NJ_G0028865	Elavl2	89	37.037	MGP_C57BL6NJ_G0036541	Pabpc5	94	37.037
MGP_C57BL6NJ_G0028865	Elavl2	90	37.349	MGP_C57BL6NJ_G0023550	Pabpc6	60	37.349
MGP_C57BL6NJ_G0028865	Elavl2	83	39.506	MGP_C57BL6NJ_G0025747	Celf2	87	33.333
MGP_C57BL6NJ_G0028865	Elavl2	89	34.940	MGP_C57BL6NJ_G0029162	Pabpc4	59	32.759
MGP_C57BL6NJ_G0028865	Elavl2	89	34.940	MGP_C57BL6NJ_G0027608	Pabpc4l	96	34.940
MGP_C57BL6NJ_G0028865	Elavl2	96	34.615	MGP_C57BL6NJ_G0031411	Tia1	89	34.615
MGP_C57BL6NJ_G0028865	Elavl2	72	32.632	MGP_C57BL6NJ_G0019317	Msi2	70	31.250
MGP_C57BL6NJ_G0028865	Elavl2	93	34.615	MGP_C57BL6NJ_G0033576	Tial1	72	34.615
MGP_C57BL6NJ_G0028865	Elavl2	67	35.714	MGP_C57BL6NJ_G0030526	Snrnp35	60	37.500
MGP_C57BL6NJ_G0028865	Elavl2	89	36.145	MGP_C57BL6NJ_G0024778	Pabpc2	59	36.145
MGP_C57BL6NJ_G0028865	Elavl2	93	30.939	MGP_C57BL6NJ_G0028025	Sf3b4	59	33.140
MGP_C57BL6NJ_G0028865	Elavl2	100	89.751	MGP_C57BL6NJ_G0028998	Elavl4	99	89.315
MGP_C57BL6NJ_G0028865	Elavl2	76	34.831	MGP_C57BL6NJ_G0036247	Rbmx	86	34.831
MGP_C57BL6NJ_G0028865	Elavl2	69	37.209	MGP_C57BL6NJ_G0035900	Rbms3	83	37.222
MGP_C57BL6NJ_G0028865	Elavl2	89	32.680	MGP_C57BL6NJ_G0028476	-	60	32.680
MGP_C57BL6NJ_G0028865	Elavl2	89	37.349	MGP_C57BL6NJ_G0022203	Pabpc1	58	37.349
MGP_C57BL6NJ_G0028865	Elavl2	66	30.952	MGP_C57BL6NJ_G0029292	Trnau1ap	98	30.952
MGP_C57BL6NJ_G0028865	Elavl2	91	35.632	MGP_C57BL6NJ_G0027972	Celf3	97	35.632
MGP_C57BL6NJ_G0028865	Elavl2	92	34.940	MGP_C57BL6NJ_G0027257	Pabpc1l	67	34.940