EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0028990 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 36116 bases
Position: chr4:113941864-113977979
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0067367	Calreticulin	PF00262.18	1.2e-74	1	2
MGP_C57BL6NJ_P0067367	Calreticulin	PF00262.18	1.2e-74	2	2
MGP_C57BL6NJ_P0067366	Calreticulin	PF00262.18	1.5e-70	1	2
MGP_C57BL6NJ_P0067366	Calreticulin	PF00262.18	1.5e-70	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0067366	-	1218	XM_006502653	MGP_C57BL6NJ_P0067366	405 (aa)	XP_006502718	A2A8Z3
MGP_C57BL6NJ_T0067367	-	1606	-	MGP_C57BL6NJ_P0067367	420 (aa)	-	-
MGP_C57BL6NJ_T0067368	-	532	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0028990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0028990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0028990	Calr4	83	46.552	MGP_C57BL6NJ_G0034277	Calr3	81	47.531
MGP_C57BL6NJ_G0028990	Calr4	78	66.869	MGP_C57BL6NJ_G0034369	Calr	80	66.366
MGP_C57BL6NJ_G0028990	Calr4	71	36.950	MGP_C57BL6NJ_G0034327	Clgn	56	36.364
MGP_C57BL6NJ_G0028990	Calr4	76	37.598	MGP_C57BL6NJ_G0018636	Canx	65	37.859