EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029041 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 31589 bases
Position: chr4:121493633-121525221
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0067586	ResIII	PF04851.15	2.2e-09	1	1
MGP_C57BL6NJ_P0067587	ResIII	PF04851.15	2.2e-09	1	1
MGP_C57BL6NJ_P0067586	DEAD	PF00270.29	9e-07	1	1
MGP_C57BL6NJ_P0067587	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0067586	-	2780	-	MGP_C57BL6NJ_P0067586	747 (aa)	-	-
MGP_C57BL6NJ_T0067587	-	3025	-	MGP_C57BL6NJ_P0067587	747 (aa)	-	-
MGP_C57BL6NJ_T0067585	-	4571	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0067590	-	1517	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0067588	-	654	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0067589	-	209	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0029041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029041	Rad54l	66	30.112	MGP_C57BL6NJ_G0031265	Smarcad1	50	30.112
MGP_C57BL6NJ_G0029041	Rad54l	66	30.785	MGP_C57BL6NJ_G0028059	Chd1l	50	30.584
MGP_C57BL6NJ_G0029041	Rad54l	66	33.267	MGP_C57BL6NJ_G0036182	Smarca1	61	32.031
MGP_C57BL6NJ_G0029041	Rad54l	88	44.604	MGP_C57BL6NJ_G0028466	Rad54b	76	44.604