EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029204 (Gene tree)
Gene ID: -
Gene Symbol: Ago3
Alias: AW048688|C130014L07Rik|Eif2c3|argonaute 3|eIF2C3
Full Name: argonaute RISC catalytic subunit 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 100802 bases
Position: chr4:132898683-132999484
Accession: 2446634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0068278	PAZ	PF02170.22	1.7e-27	1	1
MGP_C57BL6NJ_P0068278	Piwi	PF02171.17	2.9e-113	1	1
MGP_C57BL6NJ_P0068277	Piwi	PF02171.17	5e-57	1	1
MGP_C57BL6NJ_P0068279	Piwi	PF02171.17	7.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0068280	-	625	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0068281	-	690	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0068282	-	613	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0068279	-	433	-	MGP_C57BL6NJ_P0068279	144 (aa)	-	-
MGP_C57BL6NJ_T0068278	-	15594	-	MGP_C57BL6NJ_P0068278	860 (aa)	-	-
MGP_C57BL6NJ_T0068277	-	682	XM_006502917	MGP_C57BL6NJ_P0068277	161 (aa)	XP_006502980	Q8CJF9

Gene Model

Click here to download MGP_C57BL6NJ_G0029204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029204	Ago3	99	85.159	MGP_C57BL6NJ_G0029205	Ago1	100	89.150
MGP_C57BL6NJ_G0029204	Ago3	100	80.734	MGP_C57BL6NJ_G0029206	Ago4	100	80.734
MGP_C57BL6NJ_G0029204	Ago3	83	38.519	MGP_C57BL6NJ_G0034846	Piwil4	80	39.161
MGP_C57BL6NJ_G0029204	Ago3	91	90.476	MGP_C57BL6NJ_G0022324	Ago2	99	79.538