EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029205 (Gene tree)
Gene ID: -
Gene Symbol: Ago1
Alias: Eif2c1|argonaute 1
Full Name: argonaute RISC catalytic subunit 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 33735 bases
Position: chr4:133004940-133038674
Accession: 2446630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0068283	PAZ	PF02170.22	1.7e-28	1	1
MGP_C57BL6NJ_P0068285	PAZ	PF02170.22	6.8e-13	1	1
MGP_C57BL6NJ_P0068285	Piwi	PF02171.17	8.5e-111	1	1
MGP_C57BL6NJ_P0068283	Piwi	PF02171.17	2.2e-110	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0068283	-	7227	XM_006503067	MGP_C57BL6NJ_P0068283	857 (aa)	XP_011238822	Q8CJG1
MGP_C57BL6NJ_T0068284	-	3606	-	MGP_C57BL6NJ_P0068284	132 (aa)	-	-
MGP_C57BL6NJ_T0068285	-	1662	-	MGP_C57BL6NJ_P0068285	553 (aa)	-	-
MGP_C57BL6NJ_T0068286	-	588	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0068287	-	678	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0029205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029205	Ago1	100	86.257	MGP_C57BL6NJ_G0022324	Ago2	97	83.790
MGP_C57BL6NJ_G0029205	Ago1	100	84.248	MGP_C57BL6NJ_G0029206	Ago4	99	82.670
MGP_C57BL6NJ_G0029205	Ago1	100	89.150	MGP_C57BL6NJ_G0029204	Ago3	99	85.159