EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0029292 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
18491 bases
Position
chr4:139306621-139325111
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0068711RRM_1PF00076.229.9e-2712
MGP_C57BL6NJ_P0068711RRM_1PF00076.229.9e-2722
MGP_C57BL6NJ_P0068710RRM_1PF00076.223.3e-1711
MGP_C57BL6NJ_P0068715RRM_1PF00076.221.6e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0068716-600-MGP_C57BL6NJ_P006871647 (aa)--
MGP_C57BL6NJ_T0068717-553--- (aa)--
MGP_C57BL6NJ_T0068714-1017-MGP_C57BL6NJ_P006871486 (aa)--
MGP_C57BL6NJ_T0068715-474-MGP_C57BL6NJ_P0068715146 (aa)--
MGP_C57BL6NJ_T0068712-1791--- (aa)--
MGP_C57BL6NJ_T0068713-650--- (aa)--
MGP_C57BL6NJ_T0068710-961XM_011250332MGP_C57BL6NJ_P0068710247 (aa)XP_011248634Q80VC6
MGP_C57BL6NJ_T0068711-1130-MGP_C57BL6NJ_P0068711287 (aa)--
MGP_C57BL6NJ_T0068721-621--- (aa)--
MGP_C57BL6NJ_T0068718-663-MGP_C57BL6NJ_P006871849 (aa)--
MGP_C57BL6NJ_T0068719-679--- (aa)--
MGP_C57BL6NJ_T0068720-371-MGP_C57BL6NJ_P006872070 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0029292's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029292's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0029292Trnau1ap8834.211MGP_C57BL6NJ_G0027608Pabpc4l8931.875
MGP_C57BL6NJ_G0029292Trnau1ap9830.952MGP_C57BL6NJ_G0028865Elavl26630.952
MGP_C57BL6NJ_G0029292Trnau1ap6032.386MGP_C57BL6NJ_G0033576Tial17333.019
MGP_C57BL6NJ_G0029292Trnau1ap7930.198MGP_C57BL6NJ_G0031411Tia16031.285

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