EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029473 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 23482 bases
Position: chr4:149531078-149554559
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_C57BL6NJ_P0069492	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_C57BL6NJ_P0069492	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0069498	-	867	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0069496	-	785	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0069497	-	771	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0069494	-	2973	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0069495	-	338	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0069492	-	2722	XM_006538727	MGP_C57BL6NJ_P0069492	794 (aa)	XP_006538790	Q60821
MGP_C57BL6NJ_T0069493	-	3478	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0029473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029473	Zbtb17	58	42.042	MGP_C57BL6NJ_G0021088	Zfp759	87	42.560
MGP_C57BL6NJ_G0029473	Zbtb17	59	36.986	MGP_C57BL6NJ_G0018741	Zfp672	90	40.000
MGP_C57BL6NJ_G0029473	Zbtb17	58	40.064	MGP_C57BL6NJ_G0033529	Zfp747	67	40.064
MGP_C57BL6NJ_G0029473	Zbtb17	69	44.706	MGP_C57BL6NJ_G0032439	Zfp420	97	44.706
MGP_C57BL6NJ_G0029473	Zbtb17	79	46.354	MGP_C57BL6NJ_G0027540	Mynn	85	46.354
MGP_C57BL6NJ_G0029473	Zbtb17	74	44.444	MGP_C57BL6NJ_G0018977	Bcl6b	68	45.312
MGP_C57BL6NJ_G0029473	Zbtb17	58	42.727	MGP_C57BL6NJ_G0025014	Zfp236	69	42.727
MGP_C57BL6NJ_G0029473	Zbtb17	75	38.288	MGP_C57BL6NJ_G0021105	Zfp748	91	44.109
MGP_C57BL6NJ_G0029473	Zbtb17	67	42.775	MGP_C57BL6NJ_G0023637	Zfp51	82	42.775
MGP_C57BL6NJ_G0029473	Zbtb17	64	38.710	MGP_C57BL6NJ_G0023635	Zfp677	85	42.566
MGP_C57BL6NJ_G0029473	Zbtb17	59	32.021	MGP_C57BL6NJ_G0032301	Zfp574	71	38.532
MGP_C57BL6NJ_G0029473	Zbtb17	56	40.741	MGP_C57BL6NJ_G0032019	Zfp865	78	35.743
MGP_C57BL6NJ_G0029473	Zbtb17	54	46.512	MGP_C57BL6NJ_G0034637	Zfp1	67	42.083
MGP_C57BL6NJ_G0029473	Zbtb17	63	38.614	MGP_C57BL6NJ_G0031136	Repin1	93	38.614
MGP_C57BL6NJ_G0029473	Zbtb17	55	41.083	MGP_C57BL6NJ_G0018791	Zfp867	81	41.083
MGP_C57BL6NJ_G0029473	Zbtb17	71	39.891	MGP_C57BL6NJ_G0023659	Zfp945	93	39.233
MGP_C57BL6NJ_G0029473	Zbtb17	55	43.322	MGP_C57BL6NJ_G0018644	Zfp454	66	42.424
MGP_C57BL6NJ_G0029473	Zbtb17	62	50.909	MGP_C57BL6NJ_G0029938	Zbtb49	62	67.742
MGP_C57BL6NJ_G0029473	Zbtb17	56	35.083	MGP_C57BL6NJ_G0027315	Zfp334	65	39.216
MGP_C57BL6NJ_G0029473	Zbtb17	58	42.857	MGP_C57BL6NJ_G0032591	Zfp715	89	43.636
MGP_C57BL6NJ_G0029473	Zbtb17	56	41.964	MGP_C57BL6NJ_G0020666	Zkscan4	57	41.964
MGP_C57BL6NJ_G0029473	Zbtb17	56	42.638	MGP_C57BL6NJ_G0034971	Zfp872	83	41.964
MGP_C57BL6NJ_G0029473	Zbtb17	62	43.182	MGP_C57BL6NJ_G0032266	Zfp235	71	44.248
MGP_C57BL6NJ_G0029473	Zbtb17	59	46.746	MGP_C57BL6NJ_G0032267	Zfp111	72	46.746
MGP_C57BL6NJ_G0029473	Zbtb17	61	40.719	MGP_C57BL6NJ_G0030303	4930522L14Rik	98	40.719
MGP_C57BL6NJ_G0029473	Zbtb17	58	42.857	MGP_C57BL6NJ_G0033526	Zfp768	52	42.231
MGP_C57BL6NJ_G0029473	Zbtb17	61	43.939	MGP_C57BL6NJ_G0032265	Zfp112	61	43.939
MGP_C57BL6NJ_G0029473	Zbtb17	72	34.627	MGP_C57BL6NJ_G0023666	Zscan10	78	43.165
MGP_C57BL6NJ_G0029473	Zbtb17	61	40.576	MGP_C57BL6NJ_G0034908	Zfp26	79	43.413
MGP_C57BL6NJ_G0029473	Zbtb17	56	41.304	MGP_C57BL6NJ_G0021087	Rslcan18	66	41.304
MGP_C57BL6NJ_G0029473	Zbtb17	59	43.976	MGP_C57BL6NJ_G0034261	Zfp709	87	43.976
MGP_C57BL6NJ_G0029473	Zbtb17	58	40.968	MGP_C57BL6NJ_G0034262	Zfp882	85	42.985
MGP_C57BL6NJ_G0029473	Zbtb17	56	40.947	MGP_C57BL6NJ_G0018653	Zfp354a	69	43.953
MGP_C57BL6NJ_G0029473	Zbtb17	78	39.568	MGP_C57BL6NJ_G0027031	Gzf1	83	39.568
MGP_C57BL6NJ_G0029473	Zbtb17	62	34.819	MGP_C57BL6NJ_G0034479	Zfp319	91	37.805
MGP_C57BL6NJ_G0029473	Zbtb17	56	44.086	MGP_C57BL6NJ_G0032271	Zfp94	76	44.086
MGP_C57BL6NJ_G0029473	Zbtb17	79	32.955	MGP_C57BL6NJ_G0021364	Zfp131	73	31.183