EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029666 (Gene tree)
Gene ID: -
Gene Symbol: Cpsf3l
Alias: 2410006F12Rik|AU044035|Ints11
Full Name: cleavage and polyadenylation specific factor 3-like
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 22476 bases
Position: chr4:165916948-165939423
Accession: 1919207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0070343	Beta-Casp	PF10996.8	1e-25	1	1
MGP_C57BL6NJ_P0070342	Beta-Casp	PF10996.8	1.1e-25	1	1
MGP_C57BL6NJ_P0070342	Lactamase_B	PF00753.27	1.8e-10	1	1
MGP_C57BL6NJ_P0070343	Lactamase_B	PF00753.27	9.1e-10	1	1
MGP_C57BL6NJ_P0070343	RMMBL	PF07521.12	1.1e-16	1	1
MGP_C57BL6NJ_P0070342	RMMBL	PF07521.12	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0070344	-	340	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0070345	-	880	-	MGP_C57BL6NJ_P0070345	94 (aa)	-	-
MGP_C57BL6NJ_T0070346	-	481	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0070341	-	2197	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0070342	-	2368	-	MGP_C57BL6NJ_P0070342	600 (aa)	-	-
MGP_C57BL6NJ_T0070343	-	1884	-	MGP_C57BL6NJ_P0070343	578 (aa)	-	-
MGP_C57BL6NJ_T0070348	-	517	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029666	Cpsf3l	82	37.945	MGP_C57BL6NJ_G0020015	Cpsf3	71	37.945