EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0029938 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 30719 bases
Position: chr5:38539255-38569973
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_C57BL6NJ_P0071912	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_C57BL6NJ_P0071917	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_C57BL6NJ_P0071917	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_C57BL6NJ_P0071920	zf-C2H2	PF00096.26	8.1e-06	1	1
MGP_C57BL6NJ_P0071912	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0071916	-	2271	-	MGP_C57BL6NJ_P0071916	444 (aa)	-	-
MGP_C57BL6NJ_T0071917	-	463	-	MGP_C57BL6NJ_P0071917	120 (aa)	-	-
MGP_C57BL6NJ_T0071914	-	1654	-	MGP_C57BL6NJ_P0071914	110 (aa)	-	-
MGP_C57BL6NJ_T0071915	-	2028	-	MGP_C57BL6NJ_P0071915	65 (aa)	-	-
MGP_C57BL6NJ_T0071912	-	2978	-	MGP_C57BL6NJ_P0071912	756 (aa)	-	-
MGP_C57BL6NJ_T0071913	-	2721	-	MGP_C57BL6NJ_P0071913	428 (aa)	-	-
MGP_C57BL6NJ_T0071911	-	2868	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0071921	-	1337	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0071918	-	688	-	MGP_C57BL6NJ_P0071918	95 (aa)	-	-
MGP_C57BL6NJ_T0071919	-	420	-	MGP_C57BL6NJ_P0071919	51 (aa)	-	-
MGP_C57BL6NJ_T0071920	-	2645	-	MGP_C57BL6NJ_P0071920	480 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0029938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0029938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029938	Zbtb49	62	47.887	MGP_C57BL6NJ_G0016956	Zbtb41	71	41.279
MGP_C57BL6NJ_G0029938	Zbtb49	96	45.070	MGP_C57BL6NJ_G0031270	Prdm5	79	40.244
MGP_C57BL6NJ_G0029938	Zbtb49	62	50.704	MGP_C57BL6NJ_G0023666	Zscan10	89	47.953
MGP_C57BL6NJ_G0029938	Zbtb49	60	45.714	MGP_C57BL6NJ_G0018977	Bcl6b	54	47.368
MGP_C57BL6NJ_G0029938	Zbtb49	78	45.833	MGP_C57BL6NJ_G0031616	Zfp637	78	46.061
MGP_C57BL6NJ_G0029938	Zbtb49	62	51.786	MGP_C57BL6NJ_G0030274	Gfi1	100	49.219
MGP_C57BL6NJ_G0029938	Zbtb49	60	47.619	MGP_C57BL6NJ_G0024402	Zbtb14	64	46.000
MGP_C57BL6NJ_G0029938	Zbtb49	75	45.833	MGP_C57BL6NJ_G0021088	Zfp759	91	45.503
MGP_C57BL6NJ_G0029938	Zbtb49	64	47.887	MGP_C57BL6NJ_G0021087	Rslcan18	64	47.904
MGP_C57BL6NJ_G0029938	Zbtb49	74	53.125	MGP_C57BL6NJ_G0032267	Zfp111	70	48.454
MGP_C57BL6NJ_G0029938	Zbtb49	63	50.000	MGP_C57BL6NJ_G0018644	Zfp454	65	47.423
MGP_C57BL6NJ_G0029938	Zbtb49	85	45.714	MGP_C57BL6NJ_G0034262	Zfp882	85	46.114
MGP_C57BL6NJ_G0029938	Zbtb49	68	48.611	MGP_C57BL6NJ_G0034261	Zfp709	89	47.423
MGP_C57BL6NJ_G0029938	Zbtb49	89	50.000	MGP_C57BL6NJ_G0032439	Zfp420	98	48.744
MGP_C57BL6NJ_G0029938	Zbtb49	60	45.588	MGP_C57BL6NJ_G0023642	Gm10226	100	47.561
MGP_C57BL6NJ_G0029938	Zbtb49	78	47.143	MGP_C57BL6NJ_G0018741	Zfp672	96	48.214
MGP_C57BL6NJ_G0029938	Zbtb49	60	47.222	MGP_C57BL6NJ_G0031136	Repin1	95	38.889
MGP_C57BL6NJ_G0029938	Zbtb49	78	46.479	MGP_C57BL6NJ_G0023635	Zfp677	82	46.907
MGP_C57BL6NJ_G0029938	Zbtb49	82	50.000	MGP_C57BL6NJ_G0032271	Zfp94	76	48.454
MGP_C57BL6NJ_G0029938	Zbtb49	74	47.297	MGP_C57BL6NJ_G0032270	Zfp61	50	47.938
MGP_C57BL6NJ_G0029938	Zbtb49	62	67.742	MGP_C57BL6NJ_G0029473	Zbtb17	62	50.909
MGP_C57BL6NJ_G0029938	Zbtb49	69	47.887	MGP_C57BL6NJ_G0034908	Zfp26	80	47.668
MGP_C57BL6NJ_G0029938	Zbtb49	61	47.222	MGP_C57BL6NJ_G0018653	Zfp354a	74	48.454
MGP_C57BL6NJ_G0029938	Zbtb49	77	45.833	MGP_C57BL6NJ_G0023659	Zfp945	77	43.814
MGP_C57BL6NJ_G0029938	Zbtb49	85	47.222	MGP_C57BL6NJ_G0021105	Zfp748	92	47.668
MGP_C57BL6NJ_G0029938	Zbtb49	68	46.032	MGP_C57BL6NJ_G0026884	Zfp661	60	44.845
MGP_C57BL6NJ_G0029938	Zbtb49	62	47.887	MGP_C57BL6NJ_G0025014	Zfp236	62	43.023
MGP_C57BL6NJ_G0029938	Zbtb49	62	46.479	MGP_C57BL6NJ_G0027031	Gzf1	66	44.103
MGP_C57BL6NJ_G0029938	Zbtb49	73	49.275	MGP_C57BL6NJ_G0032591	Zfp715	62	45.026
MGP_C57BL6NJ_G0029938	Zbtb49	62	43.836	MGP_C57BL6NJ_G0035948	Zfp651	71	43.519
MGP_C57BL6NJ_G0029938	Zbtb49	78	44.444	MGP_C57BL6NJ_G0034971	Zfp872	80	44.330
MGP_C57BL6NJ_G0029938	Zbtb49	64	47.945	MGP_C57BL6NJ_G0033528	E430018J23Rik	62	45.000
MGP_C57BL6NJ_G0029938	Zbtb49	68	44.928	MGP_C57BL6NJ_G0033529	Zfp747	78	43.429
MGP_C57BL6NJ_G0029938	Zbtb49	76	50.000	MGP_C57BL6NJ_G0033526	Zfp768	51	48.810
MGP_C57BL6NJ_G0029938	Zbtb49	78	44.872	MGP_C57BL6NJ_G0018791	Zfp867	84	48.187
MGP_C57BL6NJ_G0029938	Zbtb49	76	48.611	MGP_C57BL6NJ_G0034637	Zfp1	63	49.485
MGP_C57BL6NJ_G0029938	Zbtb49	65	48.052	MGP_C57BL6NJ_G0030303	4930522L14Rik	100	47.977
MGP_C57BL6NJ_G0029938	Zbtb49	62	45.205	MGP_C57BL6NJ_G0019380	Zfp652	57	42.593
MGP_C57BL6NJ_G0029938	Zbtb49	66	48.611	MGP_C57BL6NJ_G0020666	Zkscan4	59	45.963
MGP_C57BL6NJ_G0029938	Zbtb49	78	48.611	MGP_C57BL6NJ_G0023637	Zfp51	81	45.026
MGP_C57BL6NJ_G0029938	Zbtb49	90	50.704	MGP_C57BL6NJ_G0027540	Mynn	85	45.128
MGP_C57BL6NJ_G0029938	Zbtb49	61	50.704	MGP_C57BL6NJ_G0032266	Zfp235	63	50.000
MGP_C57BL6NJ_G0029938	Zbtb49	95	48.611	MGP_C57BL6NJ_G0022420	Zfp251	69	49.741
MGP_C57BL6NJ_G0029938	Zbtb49	94	45.833	MGP_C57BL6NJ_G0027315	Zfp334	71	47.436
MGP_C57BL6NJ_G0029938	Zbtb49	74	50.000	MGP_C57BL6NJ_G0032301	Zfp574	60	43.651
MGP_C57BL6NJ_G0029938	Zbtb49	63	55.882	MGP_C57BL6NJ_G0032011	Zfp628	53	41.949