EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0029973 (Gene tree)
Gene ID: -
Gene Symbol: Ppargc1a
Alias: A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|PPAR Gamma Coactivator-1|PPARGC-1-alpha|Pgc-1alpha|Pgc-1alphaa|Pgc1|Pgc1a|Pgco1|Ppargc1
Full Name: peroxisome proliferative activated receptor%2C gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 121135 bases
Position: chr5:52521630-52642764
Accession: 1342774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0072136	RRM_1	PF00076.22	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0072137	-	3041	-	MGP_C57BL6NJ_P0072137	270 (aa)	-	-
MGP_C57BL6NJ_T0072136	-	6324	XM_006503774	MGP_C57BL6NJ_P0072136	797 (aa)	XP_006503837	O70343
MGP_C57BL6NJ_T0072139	-	488	-	MGP_C57BL6NJ_P0072139	142 (aa)	-	-
MGP_C57BL6NJ_T0072138	-	2452	-	MGP_C57BL6NJ_P0072138	266 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0029973	Ppargc1a	53	51.087	MGP_C57BL6NJ_G0024892	Ppargc1b	50	45.588