EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030007 (Gene tree)
Gene ID: -
Gene Symbol: Rpl9
Alias: -
Full Name: ribosomal protein L9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 3078 bases
Position: chr5:67703802-67706879
Accession: 1298373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0072298	Ribosomal_L6	PF00347.23	1.1e-32	1	2
MGP_C57BL6NJ_P0072298	Ribosomal_L6	PF00347.23	1.1e-32	2	2
MGP_C57BL6NJ_P0072300	Ribosomal_L6	PF00347.23	7.4e-27	1	2
MGP_C57BL6NJ_P0072300	Ribosomal_L6	PF00347.23	7.4e-27	2	2
MGP_C57BL6NJ_P0072302	Ribosomal_L6	PF00347.23	6.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0072298	-	735	-	MGP_C57BL6NJ_P0072298	192 (aa)	-	P51410
MGP_C57BL6NJ_T0072299	-	431	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0072306	-	1729	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0072304	-	456	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0072305	-	1586	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0072302	-	2690	-	MGP_C57BL6NJ_P0072302	108 (aa)	-	-
MGP_C57BL6NJ_T0072303	-	2651	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0072300	-	1193	-	MGP_C57BL6NJ_P0072300	166 (aa)	-	-
MGP_C57BL6NJ_T0072301	-	387	-	MGP_C57BL6NJ_P0072301	65 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0030007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030007	Rpl9	97	92.063	MGP_C57BL6NJ_G0019247	Rpl9-ps1	100	84.375