EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0030018 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
178170 bases
Position
chr5:68430310-68608479
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0072379RRM_1PF00076.223.6e-3713
MGP_C57BL6NJ_P0072379RRM_1PF00076.223.6e-3723
MGP_C57BL6NJ_P0072379RRM_1PF00076.223.6e-3733
MGP_C57BL6NJ_P0072375RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072375RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072375RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072376RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072376RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072376RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072377RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072377RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072377RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072378RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072378RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072378RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072380RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072380RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072380RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072381RRM_1PF00076.225.7e-3713
MGP_C57BL6NJ_P0072381RRM_1PF00076.225.7e-3723
MGP_C57BL6NJ_P0072381RRM_1PF00076.225.7e-3733
MGP_C57BL6NJ_P0072383RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0072386-530-MGP_C57BL6NJ_P00723866 (aa)--
MGP_C57BL6NJ_T0072387-452--- (aa)--
MGP_C57BL6NJ_T0072384-504--- (aa)--
MGP_C57BL6NJ_T0072385-332-MGP_C57BL6NJ_P007238513 (aa)--
MGP_C57BL6NJ_T0072382-2398--- (aa)--
MGP_C57BL6NJ_T0072379-2980-MGP_C57BL6NJ_P0072379521 (aa)--
MGP_C57BL6NJ_T0072380-3187-MGP_C57BL6NJ_P0072380590 (aa)--
MGP_C57BL6NJ_T0072378-4902-MGP_C57BL6NJ_P0072378590 (aa)--
MGP_C57BL6NJ_T0072377-4650-MGP_C57BL6NJ_P0072377590 (aa)--
MGP_C57BL6NJ_T0072376-5218-MGP_C57BL6NJ_P0072376590 (aa)--
MGP_C57BL6NJ_T0072375-4710XM_006503956MGP_C57BL6NJ_P0072375590 (aa)XP_006504019Q91WT8
MGP_C57BL6NJ_T0072381-2187-MGP_C57BL6NJ_P0072381590 (aa)--
MGP_C57BL6NJ_T0072388-464--- (aa)--
MGP_C57BL6NJ_T0072383-703-MGP_C57BL6NJ_P0072383158 (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0030018's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030018's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0030018Rbm478150.781MGP_C57BL6NJ_G0024697Dnd15841.748
MGP_C57BL6NJ_G0030018Rbm478967.376MGP_C57BL6NJ_G0025454A1cf7656.632
MGP_C57BL6NJ_G0030018Rbm478859.859MGP_C57BL6NJ_G0029389-8545.815
MGP_C57BL6NJ_G0030018Rbm478858.451MGP_C57BL6NJ_G0035602Syncrip7557.522
MGP_C57BL6NJ_G0030018Rbm479473.649MGP_C57BL6NJ_G0027748Rbm466672.468

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