EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030188 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 86857 bases
Position: chr5:98051345-98138201
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0073173	MMR_HSR1	PF01926.23	6.9e-07	1	1
MGP_C57BL6NJ_P0073171	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_C57BL6NJ_P0073169	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_C57BL6NJ_P0073174	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_C57BL6NJ_P0073176	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0073176	-	1380	-	MGP_C57BL6NJ_P0073176	432 (aa)	-	-
MGP_C57BL6NJ_T0073177	-	1119	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0073174	-	2428	-	MGP_C57BL6NJ_P0073174	431 (aa)	-	-
MGP_C57BL6NJ_T0073175	-	434	-	MGP_C57BL6NJ_P0073175	97 (aa)	-	-
MGP_C57BL6NJ_T0073172	-	1066	-	MGP_C57BL6NJ_P0073172	204 (aa)	-	-
MGP_C57BL6NJ_T0073173	-	1792	-	MGP_C57BL6NJ_P0073173	425 (aa)	-	-
MGP_C57BL6NJ_T0073170	-	640	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0073171	-	3474	-	MGP_C57BL6NJ_P0073171	425 (aa)	-	-
MGP_C57BL6NJ_T0073169	-	5028	XM_006535104	MGP_C57BL6NJ_P0073169	429 (aa)	XP_006535161	Q8C1B7

Gene Model

Click here to download MGP_C57BL6NJ_G0030188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030188	Sept11	76	40.762	MGP_C57BL6NJ_G0033520	Sept1	100	40.816
MGP_C57BL6NJ_G0030188	Sept11	98	72.771	MGP_C57BL6NJ_G0017649	Sept10	85	76.712
MGP_C57BL6NJ_G0030188	Sept11	99	79.157	MGP_C57BL6NJ_G0018690	Sept8	88	81.915
MGP_C57BL6NJ_G0030188	Sept11	69	44.000	MGP_C57BL6NJ_G0022549	Sept3	89	44.000
MGP_C57BL6NJ_G0030188	Sept11	60	38.077	MGP_C57BL6NJ_G0022895	Sept12	82	37.931
MGP_C57BL6NJ_G0030188	Sept11	99	39.954	MGP_C57BL6NJ_G0034987	Sept7	80	41.737
MGP_C57BL6NJ_G0030188	Sept11	69	43.234	MGP_C57BL6NJ_G0016739	Sept2	100	42.202
MGP_C57BL6NJ_G0030188	Sept11	100	81.713	MGP_C57BL6NJ_G0036134	Sept6	100	81.713
MGP_C57BL6NJ_G0030188	Sept11	76	41.493	MGP_C57BL6NJ_G0023031	Sept5	90	40.828
MGP_C57BL6NJ_G0030188	Sept11	67	42.953	MGP_C57BL6NJ_G0019838	Sept9	81	46.970
MGP_C57BL6NJ_G0030188	Sept11	67	43.878	MGP_C57BL6NJ_G0019298	Sept4	85	45.000