EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0030213 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 6088 bases
Position: chr5:105735036-105741123
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0073272	RRM_1	PF00076.22	2.4e-33	1	2
MGP_C57BL6NJ_P0073272	RRM_1	PF00076.22	2.4e-33	2	2
MGP_C57BL6NJ_P0073271	RRM_1	PF00076.22	5.3e-33	1	2
MGP_C57BL6NJ_P0073271	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0073271	-	2752	-	MGP_C57BL6NJ_P0073271	420 (aa)	-	-
MGP_C57BL6NJ_T0073270	-	1842	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0073273	-	2149	-	MGP_C57BL6NJ_P0073273	420 (aa)	-	-
MGP_C57BL6NJ_T0073272	-	2374	-	MGP_C57BL6NJ_P0073272	322 (aa)	-	-
MGP_C57BL6NJ_T0073275	-	1477	-	MGP_C57BL6NJ_P0073275	100 (aa)	-	-
MGP_C57BL6NJ_T0073274	-	884	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0073276	-	846	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030213	Hnrnpdl	78	41.634	MGP_C57BL6NJ_G0019317	Msi2	100	54.867
MGP_C57BL6NJ_G0030213	Hnrnpdl	66	31.034	MGP_C57BL6NJ_G0028025	Sf3b4	53	31.250
MGP_C57BL6NJ_G0030213	Hnrnpdl	55	37.059	MGP_C57BL6NJ_G0026275	Hnrnpa3	79	32.237
MGP_C57BL6NJ_G0030213	Hnrnpdl	51	34.706	MGP_C57BL6NJ_G0021011	Hnrnpa0	56	34.706
MGP_C57BL6NJ_G0030213	Hnrnpdl	89	57.292	MGP_C57BL6NJ_G0018659	Hnrnpab	82	58.419
MGP_C57BL6NJ_G0030213	Hnrnpdl	58	38.542	MGP_C57BL6NJ_G0031170	Hnrnpa2b1	58	38.824
MGP_C57BL6NJ_G0030213	Hnrnpdl	75	39.676	MGP_C57BL6NJ_G0030399	Msi1	58	48.052
MGP_C57BL6NJ_G0030213	Hnrnpdl	87	64.599	MGP_C57BL6NJ_G0030211	Hnrnpd	100	80.000
MGP_C57BL6NJ_G0030213	Hnrnpdl	64	30.000	MGP_C57BL6NJ_G0029559	Tardbp	77	31.447
MGP_C57BL6NJ_G0030213	Hnrnpdl	54	36.709	MGP_C57BL6NJ_G0017880	Cirbp	73	36.709
MGP_C57BL6NJ_G0030213	Hnrnpdl	69	36.036	MGP_C57BL6NJ_G0017886	Dazap1	99	39.881