EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030303 (Gene tree)
Gene ID: -
Gene Symbol: 4930522L14Rik
Alias: -
Full Name: RIKEN cDNA 4930522L14 gene
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 1511 bases
Position: chr5:116597802-116599312
Accession: 1925270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	1	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	2	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	3	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	4	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	5	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	6	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	7	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	8	9
MGP_C57BL6NJ_P0073689	zf-C2H2	PF00096.26	1.2e-48	9	9
MGP_C57BL6NJ_P0073689	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0073689	-	1444	XM_011249622	MGP_C57BL6NJ_P0073689	402 (aa)	XP_011247924	E9QAG4

Gene Model

Click here to download MGP_C57BL6NJ_G0030303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	39.823	MGP_C57BL6NJ_G0025014	Zfp236	79	35.772
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	33.854	MGP_C57BL6NJ_G0023666	Zscan10	80	33.503
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.649	MGP_C57BL6NJ_G0034637	Zfp1	75	44.649
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	46.205	MGP_C57BL6NJ_G0018644	Zfp454	66	46.205
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	49.223	MGP_C57BL6NJ_G0034261	Zfp709	90	49.223
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	48.378	MGP_C57BL6NJ_G0034262	Zfp882	85	48.378
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	46.530	MGP_C57BL6NJ_G0034908	Zfp26	79	46.530
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	51.304	MGP_C57BL6NJ_G0031616	Zfp637	72	48.718
MGP_C57BL6NJ_G0030303	4930522L14Rik	91	38.421	MGP_C57BL6NJ_G0019380	Zfp652	57	32.768
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	41.315	MGP_C57BL6NJ_G0020666	Zkscan4	62	40.928
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	34.536	MGP_C57BL6NJ_G0031136	Repin1	96	34.536
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	43.695	MGP_C57BL6NJ_G0032265	Zfp112	60	43.695
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	42.745	MGP_C57BL6NJ_G0018653	Zfp354a	79	43.814
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.141	MGP_C57BL6NJ_G0027315	Zfp334	66	44.882
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	43.990	MGP_C57BL6NJ_G0032591	Zfp715	60	43.990
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	35.465	MGP_C57BL6NJ_G0034479	Zfp319	86	34.903
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	38.182	MGP_C57BL6NJ_G0018741	Zfp672	93	40.000
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	45.833	MGP_C57BL6NJ_G0021087	Rslcan18	66	45.833
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	45.170	MGP_C57BL6NJ_G0021088	Zfp759	89	45.170
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	48.607	MGP_C57BL6NJ_G0034971	Zfp872	86	48.607
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	42.545	MGP_C57BL6NJ_G0033526	Zfp768	52	41.727
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	40.719	MGP_C57BL6NJ_G0029473	Zbtb17	61	40.719
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	48.208	MGP_C57BL6NJ_G0018791	Zfp867	82	48.208
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	34.906	MGP_C57BL6NJ_G0027353	Zfp64	71	32.216
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	37.821	MGP_C57BL6NJ_G0030274	Gfi1	99	39.683
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	40.347	MGP_C57BL6NJ_G0022420	Zfp251	68	40.347
MGP_C57BL6NJ_G0030303	4930522L14Rik	100	47.977	MGP_C57BL6NJ_G0029938	Zbtb49	65	48.052
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	40.517	MGP_C57BL6NJ_G0031715	Zfp384	51	40.517
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	48.187	MGP_C57BL6NJ_G0032439	Zfp420	99	48.187
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	45.385	MGP_C57BL6NJ_G0032266	Zfp235	72	45.385
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	46.429	MGP_C57BL6NJ_G0032267	Zfp111	73	46.429
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	47.414	MGP_C57BL6NJ_G0031270	Prdm5	70	47.414
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	32.853	MGP_C57BL6NJ_G0032301	Zfp574	93	42.308
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.103	MGP_C57BL6NJ_G0021105	Zfp748	92	44.103
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	38.095	MGP_C57BL6NJ_G0032011	Zfp628	59	41.117
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	33.333	MGP_C57BL6NJ_G0032019	Zfp865	83	31.034
MGP_C57BL6NJ_G0030303	4930522L14Rik	98	45.619	MGP_C57BL6NJ_G0023659	Zfp945	83	45.619
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	35.714	MGP_C57BL6NJ_G0016956	Zbtb41	50	35.714
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	36.502	MGP_C57BL6NJ_G0033528	E430018J23Rik	68	36.502
MGP_C57BL6NJ_G0030303	4930522L14Rik	99	37.143	MGP_C57BL6NJ_G0033529	Zfp747	71	37.143
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	42.564	MGP_C57BL6NJ_G0023637	Zfp51	88	42.564
MGP_C57BL6NJ_G0030303	4930522L14Rik	100	43.457	MGP_C57BL6NJ_G0023635	Zfp677	91	43.457
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	42.105	MGP_C57BL6NJ_G0032271	Zfp94	74	42.105
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	46.667	MGP_C57BL6NJ_G0032270	Zfp61	54	47.115
MGP_C57BL6NJ_G0030303	4930522L14Rik	97	44.928	MGP_C57BL6NJ_G0026884	Zfp661	67	44.928