EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030395 (Gene tree)
Gene ID: -
Gene Symbol: Srsf9
Alias: 25kDa|2610029M16Rik|SRp30c|Sfrs9
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 6180 bases
Position: chr5:122741740-122747919
Accession: 104896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0074159	RRM_1	PF00076.22	3.6e-33	1	2
MGP_C57BL6NJ_P0074159	RRM_1	PF00076.22	3.6e-33	2	2
MGP_C57BL6NJ_P0074162	RRM_1	PF00076.22	9.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0074159	-	1162	XM_011248158	MGP_C57BL6NJ_P0074159	222 (aa)	XP_011246460	Q9D0B0
MGP_C57BL6NJ_T0074160	-	901	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0074162	-	767	-	MGP_C57BL6NJ_P0074162	158 (aa)	-	-
MGP_C57BL6NJ_T0074161	-	474	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0030395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030395	Srsf9	70	38.674	MGP_C57BL6NJ_G0027236	Srsf6	51	47.297
MGP_C57BL6NJ_G0030395	Srsf9	68	39.394	MGP_C57BL6NJ_G0020284	Srsf5	89	48.780
MGP_C57BL6NJ_G0030395	Srsf9	78	70.330	MGP_C57BL6NJ_G0019312	Srsf1	79	79.762