EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_C57BL6NJ_G0030523 (Gene tree)
Gene ID
-
Gene Symbol
Sbno1
Alias
9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno
Full Name
strawberry notch homolog 1 (Drosophila)
Gene Type
protein_coding
Species
Mus_musculus_c57bl6nj
Status
putative
Strand
Minus strand
Length
67575 bases
Position
chr5:133146657-133214231
Accession
2384298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_C57BL6NJ_P0074914ResIIIPF04851.152.1e-0711
MGP_C57BL6NJ_P0074910ResIIIPF04851.152.2e-0711
MGP_C57BL6NJ_P0074912ResIIIPF04851.152.6e-0711
MGP_C57BL6NJ_P0074903ResIIIPF04851.153.6e-0711
MGP_C57BL6NJ_P0074904ResIIIPF04851.153.6e-0711
MGP_C57BL6NJ_P0074905ResIIIPF04851.153.6e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_C57BL6NJ_T0074915-5297-MGP_C57BL6NJ_P0074915263 (aa)--
MGP_C57BL6NJ_T0074920-2032--- (aa)--
MGP_C57BL6NJ_T0074914-2100-MGP_C57BL6NJ_P0074914663 (aa)--
MGP_C57BL6NJ_T0074910-2413-MGP_C57BL6NJ_P0074910755 (aa)--
MGP_C57BL6NJ_T0074916-1224-MGP_C57BL6NJ_P0074916241 (aa)--
MGP_C57BL6NJ_T0074917-772-MGP_C57BL6NJ_P0074917211 (aa)--
MGP_C57BL6NJ_T0074906-1061--- (aa)--
MGP_C57BL6NJ_T0074907-962--- (aa)--
MGP_C57BL6NJ_T0074904-10155-MGP_C57BL6NJ_P00749041391 (aa)--
MGP_C57BL6NJ_T0074905-4170-MGP_C57BL6NJ_P00749051390 (aa)--
MGP_C57BL6NJ_T0074911-599--- (aa)--
MGP_C57BL6NJ_T0074903-10065XM_006530317MGP_C57BL6NJ_P00749031391 (aa)XP_006530380A0A0G2JDL6
MGP_C57BL6NJ_T0074913-1191--- (aa)--
MGP_C57BL6NJ_T0074912-2511-MGP_C57BL6NJ_P0074912785 (aa)--
MGP_C57BL6NJ_T0074919-353-MGP_C57BL6NJ_P007491992 (aa)--
MGP_C57BL6NJ_T0074918-599-MGP_C57BL6NJ_P0074918133 (aa)--
MGP_C57BL6NJ_T0074908-652--- (aa)--
MGP_C57BL6NJ_T0074909-1512--- (aa)--
Gene Model
Click here to download MGP_C57BL6NJ_G0030523's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030523's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_C57BL6NJ_G0030523Sbno19567.982MGP_C57BL6NJ_G0017875Sbno27067.800

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