EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030643 (Gene tree)
Gene ID: -
Gene Symbol: Plod3
Alias: AI414586|LH3|lysyl hydroxylase 3
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 9630 bases
Position: chr5:146967600-146977229
Accession: 1347008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0075596	2OG-FeII_Oxy	PF03171.20	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0075598	-	2843	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0075599	-	932	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0075596	-	3280	XM_006504423	MGP_C57BL6NJ_P0075596	741 (aa)	XP_006504486	Q9R0E1
MGP_C57BL6NJ_T0075597	-	2362	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0075600	-	842	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0075601	-	600	-	MGP_C57BL6NJ_P0075601	199 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0030643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030643	Plod3	100	57.895	MGP_C57BL6NJ_G0035624	Plod2	95	59.829
MGP_C57BL6NJ_G0030643	Plod3	95	60.369	MGP_C57BL6NJ_G0029540	Plod1	97	60.369