EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030818 (Gene tree)
Gene ID: -
Gene Symbol: Gtf3a
Alias: 2010015D03Rik|2610111I01Rik|5330403M05Rik
Full Name: general transcription factor III A
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 6958 bases
Position: chr5:158144952-158151909
Accession: 1913846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0076396	zf-C2H2	PF00096.26	7.7e-34	1	5
MGP_C57BL6NJ_P0076396	zf-C2H2	PF00096.26	7.7e-34	2	5
MGP_C57BL6NJ_P0076396	zf-C2H2	PF00096.26	7.7e-34	3	5
MGP_C57BL6NJ_P0076396	zf-C2H2	PF00096.26	7.7e-34	4	5
MGP_C57BL6NJ_P0076396	zf-C2H2	PF00096.26	7.7e-34	5	5
MGP_C57BL6NJ_P0076394	zf-C2H2	PF00096.26	1.5e-33	1	5
MGP_C57BL6NJ_P0076394	zf-C2H2	PF00096.26	1.5e-33	2	5
MGP_C57BL6NJ_P0076394	zf-C2H2	PF00096.26	1.5e-33	3	5
MGP_C57BL6NJ_P0076394	zf-C2H2	PF00096.26	1.5e-33	4	5
MGP_C57BL6NJ_P0076394	zf-C2H2	PF00096.26	1.5e-33	5	5
MGP_C57BL6NJ_P0076396	zf-met	PF12874.7	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0076395	-	1970	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0076394	-	1298	-	MGP_C57BL6NJ_P0076394	364 (aa)	-	F6RCF6
MGP_C57BL6NJ_T0076397	-	1678	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0076396	-	1426	-	MGP_C57BL6NJ_P0076396	342 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0030818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030818	Gtf3a	86	37.190	MGP_C57BL6NJ_G0026648	Wt1	50	34.286