EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0030914 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|AW214405|Lsm8|Naa38
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 7173 bases
Position: chr6:16678306-16685478
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0076928	LSM	PF01423.22	4.5e-19	1	1
MGP_C57BL6NJ_P0076931	LSM	PF01423.22	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0076931	-	503	-	MGP_C57BL6NJ_P0076931	100 (aa)	-	-
MGP_C57BL6NJ_T0076930	-	890	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0076928	-	807	-	MGP_C57BL6NJ_P0076928	96 (aa)	-	Q6ZWM4
MGP_C57BL6NJ_T0076929	-	3305	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0030914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0030914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0030914	Lsm8	73	35.526	MGP_C57BL6NJ_G0017918	Lsm7	72	35.526
MGP_C57BL6NJ_G0030914	Lsm8	92	34.091	MGP_C57BL6NJ_G0033980	Lsm1	65	34.091