EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031158 (Gene tree)
Gene ID: -
Gene Symbol: Tra2a
Alias: 1500010G04Rik|AL022798|G430041M01Rik|mAWMS1
Full Name: transformer 2 alpha homolog (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 33059 bases
Position: chr6:49377201-49410259
Accession: 1933972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0077950	RRM_1	PF00076.22	2.8e-19	1	1
MGP_C57BL6NJ_P0077953	RRM_1	PF00076.22	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0077950	-	1777	XM_006505240	MGP_C57BL6NJ_P0077950	280 (aa)	XP_006505303	A0A0N4SV13
MGP_C57BL6NJ_T0077951	-	2090	-	MGP_C57BL6NJ_P0077951	59 (aa)	-	-
MGP_C57BL6NJ_T0077952	-	3040	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0077953	-	1799	-	MGP_C57BL6NJ_P0077953	282 (aa)	-	-
MGP_C57BL6NJ_T0077954	-	3788	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0031158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031158	Tra2a	59	37.097	MGP_C57BL6NJ_G0028998	Elavl4	72	35.821
MGP_C57BL6NJ_G0031158	Tra2a	60	65.263	MGP_C57BL6NJ_G0023084	Tra2b	80	64.919