EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031170 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 8963 bases
Position: chr6:51771434-51780396
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0077999	RRM_1	PF00076.22	3.3e-32	1	2
MGP_C57BL6NJ_P0077999	RRM_1	PF00076.22	3.3e-32	2	2
MGP_C57BL6NJ_P0078005	RRM_1	PF00076.22	3.3e-32	1	2
MGP_C57BL6NJ_P0078005	RRM_1	PF00076.22	3.3e-32	2	2
MGP_C57BL6NJ_P0078002	RRM_1	PF00076.22	5e-32	1	2
MGP_C57BL6NJ_P0078002	RRM_1	PF00076.22	5e-32	2	2
MGP_C57BL6NJ_P0078006	RRM_1	PF00076.22	5e-32	1	2
MGP_C57BL6NJ_P0078006	RRM_1	PF00076.22	5e-32	2	2
MGP_C57BL6NJ_P0078004	RRM_1	PF00076.22	5.5e-32	1	2
MGP_C57BL6NJ_P0078004	RRM_1	PF00076.22	5.5e-32	2	2
MGP_C57BL6NJ_P0078008	RRM_1	PF00076.22	1.9e-15	1	1
MGP_C57BL6NJ_P0078008	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_C57BL6NJ_P0077999	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_C57BL6NJ_P0078005	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0078009	-	706	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078008	-	466	-	MGP_C57BL6NJ_P0078008	154 (aa)	-	-
MGP_C57BL6NJ_T0078003	-	1554	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078002	-	1662	-	MGP_C57BL6NJ_P0078002	341 (aa)	-	-
MGP_C57BL6NJ_T0078001	-	1542	-	MGP_C57BL6NJ_P0078001	301 (aa)	-	-
MGP_C57BL6NJ_T0078000	-	1703	-	MGP_C57BL6NJ_P0078000	353 (aa)	-	-
MGP_C57BL6NJ_T0078007	-	766	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078006	-	1638	-	MGP_C57BL6NJ_P0078006	341 (aa)	-	-
MGP_C57BL6NJ_T0078005	-	1518	-	MGP_C57BL6NJ_P0078005	301 (aa)	-	-
MGP_C57BL6NJ_T0078004	-	1728	-	MGP_C57BL6NJ_P0078004	353 (aa)	-	-
MGP_C57BL6NJ_T0078010	-	596	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078011	-	3645	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0077999	-	1647	XM_006506373	MGP_C57BL6NJ_P0077999	301 (aa)	XP_006506436	O88569

Gene Model

Click here to download MGP_C57BL6NJ_G0031170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	69	31.776	MGP_C57BL6NJ_G0016426	Boll	64	33.333
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	59	74.725	MGP_C57BL6NJ_G0026275	Hnrnpa3	59	70.792
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	50	44.737	MGP_C57BL6NJ_G0017880	Cirbp	70	44.737
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	66	32.143	MGP_C57BL6NJ_G0035394	Celf6	79	31.250
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	61	38.068	MGP_C57BL6NJ_G0018659	Hnrnpab	64	37.368
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	59	55.307	MGP_C57BL6NJ_G0021011	Hnrnpa0	91	49.640
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	56	48.193	MGP_C57BL6NJ_G0019317	Msi2	100	44.348
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	66	30.348	MGP_C57BL6NJ_G0029559	Tardbp	94	30.282
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	56	38.554	MGP_C57BL6NJ_G0036247	Rbmx	90	40.299
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	72	41.148	MGP_C57BL6NJ_G0030211	Hnrnpd	97	44.545
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	91	41.379	MGP_C57BL6NJ_G0030399	Msi1	61	43.750
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	58	38.824	MGP_C57BL6NJ_G0030213	Hnrnpdl	58	38.542
MGP_C57BL6NJ_G0031170	Hnrnpa2b1	60	41.026	MGP_C57BL6NJ_G0017886	Dazap1	99	40.237