EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031215 (Gene tree)
Gene ID: -
Gene Symbol: Lsm5
Alias: 2010208O10Rik|2310034K10Rik
Full Name: LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 3456 bases
Position: chr6:57426722-57430177
Accession: 1913623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0078201	LSM	PF01423.22	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0078201	-	276	-	MGP_C57BL6NJ_P0078201	91 (aa)	-	P62322

Gene Model

Click here to download MGP_C57BL6NJ_G0031215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031215	Lsm5	76	32.877	MGP_C57BL6NJ_G0016892	Snrpe	77	32.877
MGP_C57BL6NJ_G0031215	Lsm5	82	34.667	MGP_C57BL6NJ_G0031488	Lsm3	74	34.667