EuRBPDB

Description

Ensembl ID: MGP_C57BL6NJ_G0031265 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 76022 bases
Position: chr6:66455059-66531080
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0078332	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0078340	-	643	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078343	-	3062	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078344	-	643	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078341	-	635	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078339	-	4179	-	MGP_C57BL6NJ_P0078339	123 (aa)	-	-
MGP_C57BL6NJ_T0078338	-	2821	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078342	-	726	-	MGP_C57BL6NJ_P0078342	45 (aa)	-	-
MGP_C57BL6NJ_T0078331	-	602	XM_006505509	MGP_C57BL6NJ_P0078331	134 (aa)	XP_006505572	Q04692
MGP_C57BL6NJ_T0078345	-	2526	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078333	-	466	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078332	-	5168	-	MGP_C57BL6NJ_P0078332	1021 (aa)	-	-
MGP_C57BL6NJ_T0078335	-	734	-	MGP_C57BL6NJ_P0078335	73 (aa)	-	-
MGP_C57BL6NJ_T0078334	-	600	-	MGP_C57BL6NJ_P0078334	73 (aa)	-	-
MGP_C57BL6NJ_T0078337	-	739	-	MGP_C57BL6NJ_P0078337	73 (aa)	-	-
MGP_C57BL6NJ_T0078336	-	472	-	MGP_C57BL6NJ_P0078336	68 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031265	Smarcad1	51	37.705	MGP_C57BL6NJ_G0025511	Hells	66	37.887
MGP_C57BL6NJ_G0031265	Smarcad1	50	30.112	MGP_C57BL6NJ_G0029041	Rad54l	66	30.112
MGP_C57BL6NJ_G0031265	Smarcad1	50	35.135	MGP_C57BL6NJ_G0028059	Chd1l	51	35.135