EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031283 (Gene tree)
Gene ID: -
Gene Symbol: Serbp1
Alias: 1200009K13Rik|9330147J08Rik|AL022786|Pairbp1
Full Name: serpine1 mRNA binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 60272 bases
Position: chr6:68833692-68893963
Accession: 1914120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0078398	HABP4_PAI-RBP1	PF04774.15	5.1e-34	1	1
MGP_C57BL6NJ_P0078401	HABP4_PAI-RBP1	PF04774.15	7.6e-32	1	1
MGP_C57BL6NJ_P0078397	HABP4_PAI-RBP1	PF04774.15	2.8e-31	1	1
MGP_C57BL6NJ_P0078403	HABP4_PAI-RBP1	PF04774.15	3.8e-29	1	1
MGP_C57BL6NJ_P0078409	HABP4_PAI-RBP1	PF04774.15	1.5e-15	1	1
MGP_C57BL6NJ_P0078400	HABP4_PAI-RBP1	PF04774.15	8.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0078411	-	665	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078409	-	558	-	MGP_C57BL6NJ_P0078409	185 (aa)	-	-
MGP_C57BL6NJ_T0078408	-	836	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078407	-	717	-	MGP_C57BL6NJ_P0078407	211 (aa)	-	-
MGP_C57BL6NJ_T0078406	-	600	-	MGP_C57BL6NJ_P0078406	155 (aa)	-	-
MGP_C57BL6NJ_T0078405	-	3153	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078404	-	1166	-	MGP_C57BL6NJ_P0078404	147 (aa)	-	-
MGP_C57BL6NJ_T0078403	-	1607	-	MGP_C57BL6NJ_P0078403	392 (aa)	-	-
MGP_C57BL6NJ_T0078402	-	1928	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078401	-	1336	-	MGP_C57BL6NJ_P0078401	386 (aa)	-	-
MGP_C57BL6NJ_T0078400	-	1278	-	MGP_C57BL6NJ_P0078400	362 (aa)	-	-
MGP_C57BL6NJ_T0078410	-	612	-	MGP_C57BL6NJ_P0078410	74 (aa)	-	-
MGP_C57BL6NJ_T0078399	-	2367	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0078398	-	1657	-	MGP_C57BL6NJ_P0078398	401 (aa)	-	-
MGP_C57BL6NJ_T0078397	-	15441	-	MGP_C57BL6NJ_P0078397	407 (aa)	-	-
MGP_C57BL6NJ_T0078396	-	397	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0031283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031283	Serbp1	99	39.372	MGP_C57BL6NJ_G0021063	Habp4	96	39.461