EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031441 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 54847 bases
Position: chr6:91763757-91818603
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0079199	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_C57BL6NJ_P0079193	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_C57BL6NJ_P0079194	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_C57BL6NJ_P0079195	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_C57BL6NJ_P0079196	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_C57BL6NJ_P0079197	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_C57BL6NJ_P0079198	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0079198	-	424	-	MGP_C57BL6NJ_P0079198	88 (aa)	-	-
MGP_C57BL6NJ_T0079199	-	550	-	MGP_C57BL6NJ_P0079199	98 (aa)	-	-
MGP_C57BL6NJ_T0079196	-	1655	-	MGP_C57BL6NJ_P0079196	207 (aa)	-	-
MGP_C57BL6NJ_T0079197	-	1273	-	MGP_C57BL6NJ_P0079197	207 (aa)	-	-
MGP_C57BL6NJ_T0079194	-	2029	-	MGP_C57BL6NJ_P0079194	207 (aa)	-	-
MGP_C57BL6NJ_T0079195	-	1857	-	MGP_C57BL6NJ_P0079195	207 (aa)	-	-
MGP_C57BL6NJ_T0079193	-	2157	-	MGP_C57BL6NJ_P0079193	207 (aa)	-	P51150

Gene Model

Click here to download MGP_C57BL6NJ_G0031441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031441	Rab7	91	43.820	MGP_C57BL6NJ_G0026068	Rab14	86	40.299
MGP_C57BL6NJ_G0031441	Rab7	99	40.206	MGP_C57BL6NJ_G0020255	Rab15	81	33.520
MGP_C57BL6NJ_G0031441	Rab7	92	43.333	MGP_C57BL6NJ_G0017745	Rab36	63	36.571
MGP_C57BL6NJ_G0031441	Rab7	73	33.113	MGP_C57BL6NJ_G0028104	Nras	95	33.108
MGP_C57BL6NJ_G0031441	Rab7	91	44.944	MGP_C57BL6NJ_G0027819	Rab25	75	39.157
MGP_C57BL6NJ_G0031441	Rab7	90	48.864	MGP_C57BL6NJ_G0024393	Rab12	68	37.278
MGP_C57BL6NJ_G0031441	Rab7	95	33.333	MGP_C57BL6NJ_G0030553	Ran	96	32.544
MGP_C57BL6NJ_G0031441	Rab7	91	40.449	MGP_C57BL6NJ_G0022651	Rabl2	71	33.735
MGP_C57BL6NJ_G0031441	Rab7	97	35.789	MGP_C57BL6NJ_G0032029	Rasl2-9	76	33.140
MGP_C57BL6NJ_G0031441	Rab7	98	38.542	MGP_C57BL6NJ_G0025106	Rab1b	100	34.146
MGP_C57BL6NJ_G0031441	Rab7	94	43.478	MGP_C57BL6NJ_G0016293	Rab23	70	33.918
MGP_C57BL6NJ_G0031441	Rab7	90	48.864	MGP_C57BL6NJ_G0024539	Rab18	79	39.521
MGP_C57BL6NJ_G0031441	Rab7	91	44.944	MGP_C57BL6NJ_G0028452	Rab2a	75	39.024
MGP_C57BL6NJ_G0031441	Rab7	98	39.583	MGP_C57BL6NJ_G0018457	Rab1a	81	38.235
MGP_C57BL6NJ_G0031441	Rab7	91	47.191	MGP_C57BL6NJ_G0033057	Rab6a	94	35.000
MGP_C57BL6NJ_G0031441	Rab7	100	37.374	MGP_C57BL6NJ_G0027616	Rab33b	72	37.870
MGP_C57BL6NJ_G0031441	Rab7	93	42.857	MGP_C57BL6NJ_G0035435	Rab11a	87	38.686
MGP_C57BL6NJ_G0031441	Rab7	91	47.191	MGP_C57BL6NJ_G0035686	Rab6b	94	35.176
MGP_C57BL6NJ_G0031441	Rab7	91	46.067	MGP_C57BL6NJ_G0021694	Rab2b	80	40.881
MGP_C57BL6NJ_G0031441	Rab7	95	59.140	MGP_C57BL6NJ_G0036753	Rab9	85	55.294
MGP_C57BL6NJ_G0031441	Rab7	97	45.263	MGP_C57BL6NJ_G0024293	Rab5a	77	41.520
MGP_C57BL6NJ_G0031441	Rab7	91	46.067	MGP_C57BL6NJ_G0030405	Rab35	81	37.500
MGP_C57BL6NJ_G0031441	Rab7	83	35.714	MGP_C57BL6NJ_G0019601	Arl4d	58	32.520
MGP_C57BL6NJ_G0031441	Rab7	93	42.857	MGP_C57BL6NJ_G0023942	Rab11b	89	38.686
MGP_C57BL6NJ_G0031441	Rab7	92	47.778	MGP_C57BL6NJ_G0024384	Rab31	82	44.512
MGP_C57BL6NJ_G0031441	Rab7	66	32.117	MGP_C57BL6NJ_G0033708	Hras	96	30.808
MGP_C57BL6NJ_G0031441	Rab7	91	42.222	MGP_C57BL6NJ_G0036192	Rab33a	69	39.881
MGP_C57BL6NJ_G0031441	Rab7	92	46.667	MGP_C57BL6NJ_G0027382	Rab22a	82	40.854
MGP_C57BL6NJ_G0031441	Rab7	98	60.417	MGP_C57BL6NJ_G0036600	Rab9b	99	51.724
MGP_C57BL6NJ_G0031441	Rab7	94	35.870	MGP_C57BL6NJ_G0019954	Dnajc27	60	36.145
MGP_C57BL6NJ_G0031441	Rab7	79	31.169	MGP_C57BL6NJ_G0035663	Mras	76	33.742
MGP_C57BL6NJ_G0031441	Rab7	94	49.462	MGP_C57BL6NJ_G0019764	Rab37	76	41.071
MGP_C57BL6NJ_G0031441	Rab7	91	37.778	MGP_C57BL6NJ_G0036361	Rab39b	76	34.545
MGP_C57BL6NJ_G0031441	Rab7	90	47.727	MGP_C57BL6NJ_G0019558	Rab5c	74	43.293
MGP_C57BL6NJ_G0031441	Rab7	75	33.333	MGP_C57BL6NJ_G0031923	Kras	86	34.132
MGP_C57BL6NJ_G0031441	Rab7	92	42.222	MGP_C57BL6NJ_G0032997	Rab30	78	40.854