EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031719 (Gene tree)
Gene ID: -
Gene Symbol: Chd4
Alias: 9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075
Full Name: chromodomain helicase DNA binding protein 4
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 35323 bases
Position: chr6:131803053-131838375
Accession: 1344380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0080655	ResIII	PF04851.15	6.2e-10	1	1
MGP_C57BL6NJ_P0080656	ResIII	PF04851.15	6.6e-10	1	1
MGP_C57BL6NJ_P0080654	ResIII	PF04851.15	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0080660	-	1332	-	MGP_C57BL6NJ_P0080660	444 (aa)	-	-
MGP_C57BL6NJ_T0080661	-	821	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0080655	-	6652	-	MGP_C57BL6NJ_P0080655	1902 (aa)	-	-
MGP_C57BL6NJ_T0080654	-	6697	XM_006505280	MGP_C57BL6NJ_P0080654	1915 (aa)	XP_006505343	Q6PDQ2
MGP_C57BL6NJ_T0080657	-	369	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0080656	-	6537	-	MGP_C57BL6NJ_P0080656	1922 (aa)	-	-
MGP_C57BL6NJ_T0080659	-	618	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0080658	-	750	-	MGP_C57BL6NJ_P0080658	51 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0031719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031719	Chd4	96	72.421	MGP_C57BL6NJ_G0029611	Chd5	91	73.153
MGP_C57BL6NJ_G0031719	Chd4	95	70.529	MGP_C57BL6NJ_G0018920	Chd3	91	80.841