EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0031949 (Gene tree)
Gene ID: -
Gene Symbol: Caprin2
Alias: C1qdc1|C1qdc1,GN Kiaa1873|Eeg1|RNG140|Rng140|rng140
Full Name: caprin family member 2
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 55135 bases
Position: chr6:158037193-158092327
Accession: 2448541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0081602	Caprin-1_C	PF12287.8	5.4e-116	1	1
MGP_C57BL6NJ_P0081600	Caprin-1_C	PF12287.8	8.7e-116	1	1
MGP_C57BL6NJ_P0081601	Caprin-1_C	PF12287.8	2.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0081599	-	1163	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081609	-	740	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081608	-	598	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081605	-	925	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081604	-	554	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081607	-	6291	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081606	-	739	-	MGP_C57BL6NJ_P0081606	131 (aa)	-	-
MGP_C57BL6NJ_T0081601	-	1035	-	MGP_C57BL6NJ_P0081601	171 (aa)	-	-
MGP_C57BL6NJ_T0081600	-	3697	-	MGP_C57BL6NJ_P0081600	1031 (aa)	-	-
MGP_C57BL6NJ_T0081603	-	3294	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0081602	-	2952	-	MGP_C57BL6NJ_P0081602	812 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0031949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0031949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0031949	Caprin2	91	38.415	MGP_C57BL6NJ_G0026628	Caprin1	89	44.275