EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0032020 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 3754 bases
Position: chr7:2063544-2067297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	1	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	2	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	3	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	4	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	5	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	6	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	7	8
MGP_C57BL6NJ_P0081952	zf-C2H2	PF00096.26	2.7e-46	8	8
MGP_C57BL6NJ_P0081952	zf-met	PF12874.7	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0081952	-	2271	-	MGP_C57BL6NJ_P0081952	756 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0032020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0032020's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0032020	-	66	31.343	MGP_C57BL6NJ_G0032439	Zfp420	95	30.691
MGP_C57BL6NJ_G0032020	-	99	100.000	MGP_C57BL6NJ_G0032019	Zfp865	99	100.000
MGP_C57BL6NJ_G0032020	-	66	42.593	MGP_C57BL6NJ_G0032016	Zfp579	75	41.379
MGP_C57BL6NJ_G0032020	-	67	31.016	MGP_C57BL6NJ_G0032267	Zfp111	69	33.333
MGP_C57BL6NJ_G0032020	-	71	30.072	MGP_C57BL6NJ_G0034479	Zfp319	87	38.835
MGP_C57BL6NJ_G0032020	-	66	31.675	MGP_C57BL6NJ_G0022420	Zfp251	63	37.278
MGP_C57BL6NJ_G0032020	-	73	30.796	MGP_C57BL6NJ_G0023666	Zscan10	74	41.818
MGP_C57BL6NJ_G0032020	-	67	31.795	MGP_C57BL6NJ_G0018653	Zfp354a	69	48.148
MGP_C57BL6NJ_G0032020	-	71	34.911	MGP_C57BL6NJ_G0027315	Zfp334	66	40.000