EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0032266 (Gene tree)
Gene ID: -
Gene Symbol: Zfp235
Alias: 0610030O19Rik|AI428448
Full Name: zinc finger protein 235
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 15589 bases
Position: chr7:23145163-23160751
Accession: 1929117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	1	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	2	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	3	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	4	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	5	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	6	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	7	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	8	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	9	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	10	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	11	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	12	13
MGP_C57BL6NJ_P0082623	zf-C2H2	PF00096.26	2.9e-79	13	13
MGP_C57BL6NJ_P0082623	zf-met	PF12874.7	2.4e-06	1	3
MGP_C57BL6NJ_P0082623	zf-met	PF12874.7	2.4e-06	2	3
MGP_C57BL6NJ_P0082623	zf-met	PF12874.7	2.4e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0082619	-	1297	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0082618	-	1933	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0082622	-	1024	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0082623	-	3373	-	MGP_C57BL6NJ_P0082623	702 (aa)	-	-
MGP_C57BL6NJ_T0082620	-	1122	-	MGP_C57BL6NJ_P0082620	262 (aa)	-	-
MGP_C57BL6NJ_T0082621	-	494	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0032266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0032266's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0032266	Zfp235	99	51.276	MGP_C57BL6NJ_G0032591	Zfp715	95	51.276
MGP_C57BL6NJ_G0032266	Zfp235	66	43.411	MGP_C57BL6NJ_G0025014	Zfp236	70	43.411
MGP_C57BL6NJ_G0032266	Zfp235	66	51.163	MGP_C57BL6NJ_G0033529	Zfp747	74	51.163
MGP_C57BL6NJ_G0032266	Zfp235	71	44.248	MGP_C57BL6NJ_G0029473	Zbtb17	62	43.182
MGP_C57BL6NJ_G0032266	Zfp235	75	48.571	MGP_C57BL6NJ_G0034971	Zfp872	94	48.159
MGP_C57BL6NJ_G0032266	Zfp235	79	47.696	MGP_C57BL6NJ_G0018791	Zfp867	96	47.696
MGP_C57BL6NJ_G0032266	Zfp235	68	39.608	MGP_C57BL6NJ_G0031270	Prdm5	73	44.286
MGP_C57BL6NJ_G0032266	Zfp235	73	51.938	MGP_C57BL6NJ_G0020666	Zkscan4	77	51.938
MGP_C57BL6NJ_G0032266	Zfp235	83	48.125	MGP_C57BL6NJ_G0034261	Zfp709	99	48.125
MGP_C57BL6NJ_G0032266	Zfp235	63	50.000	MGP_C57BL6NJ_G0029938	Zbtb49	61	50.704
MGP_C57BL6NJ_G0032266	Zfp235	99	55.967	MGP_C57BL6NJ_G0026884	Zfp661	96	55.967
MGP_C57BL6NJ_G0032266	Zfp235	99	47.897	MGP_C57BL6NJ_G0023659	Zfp945	99	48.700
MGP_C57BL6NJ_G0032266	Zfp235	72	56.553	MGP_C57BL6NJ_G0032439	Zfp420	99	56.553
MGP_C57BL6NJ_G0032266	Zfp235	93	57.826	MGP_C57BL6NJ_G0032267	Zfp111	99	57.826
MGP_C57BL6NJ_G0032266	Zfp235	100	61.702	MGP_C57BL6NJ_G0032265	Zfp112	99	61.702
MGP_C57BL6NJ_G0032266	Zfp235	70	53.378	MGP_C57BL6NJ_G0021087	Rslcan18	65	53.378
MGP_C57BL6NJ_G0032266	Zfp235	99	46.204	MGP_C57BL6NJ_G0021088	Zfp759	100	46.204
MGP_C57BL6NJ_G0032266	Zfp235	61	51.852	MGP_C57BL6NJ_G0032301	Zfp574	93	45.652
MGP_C57BL6NJ_G0032266	Zfp235	62	37.240	MGP_C57BL6NJ_G0034479	Zfp319	91	37.696
MGP_C57BL6NJ_G0032266	Zfp235	99	48.115	MGP_C57BL6NJ_G0018653	Zfp354a	98	49.052
MGP_C57BL6NJ_G0032266	Zfp235	68	36.504	MGP_C57BL6NJ_G0027353	Zfp64	69	36.504
MGP_C57BL6NJ_G0032266	Zfp235	100	56.447	MGP_C57BL6NJ_G0032271	Zfp94	96	56.447
MGP_C57BL6NJ_G0032266	Zfp235	99	53.957	MGP_C57BL6NJ_G0032270	Zfp61	99	50.498
MGP_C57BL6NJ_G0032266	Zfp235	99	49.886	MGP_C57BL6NJ_G0034908	Zfp26	89	49.886
MGP_C57BL6NJ_G0032266	Zfp235	80	55.319	MGP_C57BL6NJ_G0034637	Zfp1	88	55.319
MGP_C57BL6NJ_G0032266	Zfp235	67	34.559	MGP_C57BL6NJ_G0031136	Repin1	98	46.591
MGP_C57BL6NJ_G0032266	Zfp235	65	48.503	MGP_C57BL6NJ_G0027540	Mynn	50	48.503
MGP_C57BL6NJ_G0032266	Zfp235	78	60.000	MGP_C57BL6NJ_G0018644	Zfp454	98	51.220
MGP_C57BL6NJ_G0032266	Zfp235	79	53.333	MGP_C57BL6NJ_G0021105	Zfp748	97	53.333
MGP_C57BL6NJ_G0032266	Zfp235	67	40.316	MGP_C57BL6NJ_G0032019	Zfp865	82	39.749
MGP_C57BL6NJ_G0032266	Zfp235	99	43.544	MGP_C57BL6NJ_G0034262	Zfp882	99	43.544
MGP_C57BL6NJ_G0032266	Zfp235	61	38.095	MGP_C57BL6NJ_G0032011	Zfp628	61	36.686
MGP_C57BL6NJ_G0032266	Zfp235	61	46.377	MGP_C57BL6NJ_G0030274	Gfi1	100	48.031
MGP_C57BL6NJ_G0032266	Zfp235	62	48.879	MGP_C57BL6NJ_G0033528	E430018J23Rik	61	48.879
MGP_C57BL6NJ_G0032266	Zfp235	62	56.115	MGP_C57BL6NJ_G0033526	Zfp768	51	56.071
MGP_C57BL6NJ_G0032266	Zfp235	64	41.667	MGP_C57BL6NJ_G0018741	Zfp672	99	41.333
MGP_C57BL6NJ_G0032266	Zfp235	70	52.880	MGP_C57BL6NJ_G0031616	Zfp637	98	55.556
MGP_C57BL6NJ_G0032266	Zfp235	99	57.098	MGP_C57BL6NJ_G0022420	Zfp251	96	57.098
MGP_C57BL6NJ_G0032266	Zfp235	99	48.826	MGP_C57BL6NJ_G0023637	Zfp51	94	48.826
MGP_C57BL6NJ_G0032266	Zfp235	99	52.414	MGP_C57BL6NJ_G0023635	Zfp677	99	52.414
MGP_C57BL6NJ_G0032266	Zfp235	100	47.291	MGP_C57BL6NJ_G0027315	Zfp334	99	43.787
MGP_C57BL6NJ_G0032266	Zfp235	61	41.880	MGP_C57BL6NJ_G0023666	Zscan10	79	47.009
MGP_C57BL6NJ_G0032266	Zfp235	72	45.385	MGP_C57BL6NJ_G0030303	4930522L14Rik	97	45.385