EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0032350 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 9696 bases
Position: chr7:26660497-26670192
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0082946	RRM_5	PF13893.6	6.5e-06	1	2
MGP_C57BL6NJ_P0082946	RRM_5	PF13893.6	6.5e-06	2	2
MGP_C57BL6NJ_P0082946	RRM_1	PF00076.22	1.1e-27	1	2
MGP_C57BL6NJ_P0082946	RRM_1	PF00076.22	1.1e-27	2	2
MGP_C57BL6NJ_P0082947	RRM_1	PF00076.22	1.1e-18	1	2
MGP_C57BL6NJ_P0082947	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0082949	-	1690	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0082948	-	510	-	MGP_C57BL6NJ_P0082948	44 (aa)	-	-
MGP_C57BL6NJ_T0082947	-	968	-	MGP_C57BL6NJ_P0082947	247 (aa)	-	-
MGP_C57BL6NJ_T0082946	-	1200	-	MGP_C57BL6NJ_P0082946	355 (aa)	-	-
MGP_C57BL6NJ_T0082945	-	513	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0032350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0032350	Snrpa	96	51.055	MGP_C57BL6NJ_G0026995	Snrpb2	99	63.121