EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0032411 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 15416 bases
Position: chr7:28555795-28571210
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0083174	RRM_5	PF13893.6	2.4e-60	1	2
MGP_C57BL6NJ_P0083174	RRM_5	PF13893.6	2.4e-60	2	2
MGP_C57BL6NJ_P0083178	RRM_5	PF13893.6	2.4e-60	1	2
MGP_C57BL6NJ_P0083178	RRM_5	PF13893.6	2.4e-60	2	2
MGP_C57BL6NJ_P0083179	RRM_5	PF13893.6	2.9e-60	1	2
MGP_C57BL6NJ_P0083179	RRM_5	PF13893.6	2.9e-60	2	2
MGP_C57BL6NJ_P0083176	RRM_5	PF13893.6	2e-59	1	2
MGP_C57BL6NJ_P0083176	RRM_5	PF13893.6	2e-59	2	2
MGP_C57BL6NJ_P0083174	RRM_1	PF00076.22	3.3e-22	1	2
MGP_C57BL6NJ_P0083174	RRM_1	PF00076.22	3.3e-22	2	2
MGP_C57BL6NJ_P0083178	RRM_1	PF00076.22	3.3e-22	1	2
MGP_C57BL6NJ_P0083178	RRM_1	PF00076.22	3.3e-22	2	2
MGP_C57BL6NJ_P0083179	RRM_1	PF00076.22	4.2e-22	1	2
MGP_C57BL6NJ_P0083179	RRM_1	PF00076.22	4.2e-22	2	2
MGP_C57BL6NJ_P0083176	RRM_1	PF00076.22	1.6e-16	1	1
MGP_C57BL6NJ_P0083177	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0083175	-	2275	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083174	-	2679	XM_006539556	MGP_C57BL6NJ_P0083174	586 (aa)	XP_006539619	Q8R081
MGP_C57BL6NJ_T0083177	-	502	-	MGP_C57BL6NJ_P0083177	112 (aa)	-	-
MGP_C57BL6NJ_T0083176	-	1898	-	MGP_C57BL6NJ_P0083176	456 (aa)	-	-
MGP_C57BL6NJ_T0083179	-	2180	-	MGP_C57BL6NJ_P0083179	614 (aa)	-	-
MGP_C57BL6NJ_T0083178	-	2142	-	MGP_C57BL6NJ_P0083178	586 (aa)	-	-
MGP_C57BL6NJ_T0083186	-	672	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083180	-	2426	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083181	-	1850	-	MGP_C57BL6NJ_P0083181	201 (aa)	-	-
MGP_C57BL6NJ_T0083182	-	504	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083183	-	633	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083184	-	1087	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0083185	-	768	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0032411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0032411	Hnrnpl	100	63.393	MGP_C57BL6NJ_G0024458	Hnrnpll	80	58.065
MGP_C57BL6NJ_G0032411	Hnrnpl	95	30.045	MGP_C57BL6NJ_G0017857	Ptbp1	80	30.583
MGP_C57BL6NJ_G0032411	Hnrnpl	55	36.207	MGP_C57BL6NJ_G0028757	Ptbp3	83	35.537
MGP_C57BL6NJ_G0032411	Hnrnpl	77	30.645	MGP_C57BL6NJ_G0028242	Ptbp2	77	30.645