EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0033453 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 74153 bases
Position: chr7:132228302-132302454
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0086870	Ago_hook	PF10427.9	3.4e-19	1	1
MGP_C57BL6NJ_P0086867	Ago_hook	PF10427.9	6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0086865	-	640	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086866	-	310	-	MGP_C57BL6NJ_P0086866	53 (aa)	-	-
MGP_C57BL6NJ_T0086867	-	8130	-	MGP_C57BL6NJ_P0086867	1880 (aa)	-	-
MGP_C57BL6NJ_T0086868	-	3577	-	MGP_C57BL6NJ_P0086868	35 (aa)	-	-
MGP_C57BL6NJ_T0086869	-	1783	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086873	-	606	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086872	-	939	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086871	-	4312	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086870	-	5223	-	MGP_C57BL6NJ_P0086870	1397 (aa)	-	-
MGP_C57BL6NJ_T0086875	-	3297	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0086874	-	463	-	MGP_C57BL6NJ_P0086874	154 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0033453's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0033453's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0033453	Tnrc6a	99	39.671	MGP_C57BL6NJ_G0022513	Tnrc6b	98	37.120
MGP_C57BL6NJ_G0033453	Tnrc6a	98	44.482	MGP_C57BL6NJ_G0019840	Tnrc6c	99	40.570