EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0033520 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 19715 bases
Position: chr7:136658059-136677773
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0087281	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_C57BL6NJ_P0087280	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_C57BL6NJ_P0087278	MMR_HSR1	PF01926.23	5.2e-08	1	1
MGP_C57BL6NJ_P0087277	MMR_HSR1	PF01926.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0087283	-	242	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087282	-	821	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087281	-	599	-	MGP_C57BL6NJ_P0087281	145 (aa)	-	-
MGP_C57BL6NJ_T0087280	-	706	-	MGP_C57BL6NJ_P0087280	186 (aa)	-	-
MGP_C57BL6NJ_T0087284	-	713	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087278	-	1048	-	MGP_C57BL6NJ_P0087278	328 (aa)	-	-
MGP_C57BL6NJ_T0087279	-	789	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087276	-	580	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087277	-	1101	-	MGP_C57BL6NJ_P0087277	366 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0033520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0033520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0033520	Sept1	100	50.000	MGP_C57BL6NJ_G0019838	Sept9	83	46.000
MGP_C57BL6NJ_G0033520	Sept1	100	40.816	MGP_C57BL6NJ_G0030188	Sept11	76	40.762
MGP_C57BL6NJ_G0033520	Sept1	100	68.276	MGP_C57BL6NJ_G0023031	Sept5	93	63.068
MGP_C57BL6NJ_G0033520	Sept1	100	64.828	MGP_C57BL6NJ_G0016739	Sept2	100	60.748
MGP_C57BL6NJ_G0033520	Sept1	100	66.897	MGP_C57BL6NJ_G0019298	Sept4	94	66.514
MGP_C57BL6NJ_G0033520	Sept1	100	47.260	MGP_C57BL6NJ_G0022895	Sept12	77	43.775
MGP_C57BL6NJ_G0033520	Sept1	100	40.136	MGP_C57BL6NJ_G0036134	Sept6	76	41.349
MGP_C57BL6NJ_G0033520	Sept1	100	50.685	MGP_C57BL6NJ_G0022549	Sept3	86	46.575
MGP_C57BL6NJ_G0033520	Sept1	100	43.537	MGP_C57BL6NJ_G0017649	Sept10	71	40.064
MGP_C57BL6NJ_G0033520	Sept1	100	38.095	MGP_C57BL6NJ_G0018690	Sept8	76	36.765
MGP_C57BL6NJ_G0033520	Sept1	100	59.310	MGP_C57BL6NJ_G0034987	Sept7	76	49.709