EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0033528 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 22609 bases
Position: chr7:136854960-136877568
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_C57BL6NJ_P0087302	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_C57BL6NJ_P0087302	zf-met	PF12874.7	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0087302	-	3322	XM_006507163	MGP_C57BL6NJ_P0087302	461 (aa)	XP_006507226	D3Z3V4
MGP_C57BL6NJ_T0087306	-	576	-	MGP_C57BL6NJ_P0087306	130 (aa)	-	-
MGP_C57BL6NJ_T0087305	-	2063	-	MGP_C57BL6NJ_P0087305	149 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0033528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0033528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0033528	E430018J23Rik	57	44.086	MGP_C57BL6NJ_G0032301	Zfp574	71	38.961
MGP_C57BL6NJ_G0033528	E430018J23Rik	61	41.778	MGP_C57BL6NJ_G0020666	Zkscan4	62	43.363
MGP_C57BL6NJ_G0033528	E430018J23Rik	95	42.073	MGP_C57BL6NJ_G0023659	Zfp945	98	42.073
MGP_C57BL6NJ_G0033528	E430018J23Rik	61	42.798	MGP_C57BL6NJ_G0018741	Zfp672	90	42.105
MGP_C57BL6NJ_G0033528	E430018J23Rik	62	45.000	MGP_C57BL6NJ_G0029938	Zbtb49	64	47.945
MGP_C57BL6NJ_G0033528	E430018J23Rik	89	46.748	MGP_C57BL6NJ_G0018653	Zfp354a	99	46.748
MGP_C57BL6NJ_G0033528	E430018J23Rik	71	37.838	MGP_C57BL6NJ_G0031270	Prdm5	72	37.838
MGP_C57BL6NJ_G0033528	E430018J23Rik	74	47.410	MGP_C57BL6NJ_G0032265	Zfp112	62	47.410
MGP_C57BL6NJ_G0033528	E430018J23Rik	61	48.879	MGP_C57BL6NJ_G0032266	Zfp235	62	48.879
MGP_C57BL6NJ_G0033528	E430018J23Rik	85	44.318	MGP_C57BL6NJ_G0021105	Zfp748	99	44.318
MGP_C57BL6NJ_G0033528	E430018J23Rik	60	42.197	MGP_C57BL6NJ_G0030274	Gfi1	99	45.038
MGP_C57BL6NJ_G0033528	E430018J23Rik	89	50.000	MGP_C57BL6NJ_G0034908	Zfp26	89	50.000
MGP_C57BL6NJ_G0033528	E430018J23Rik	71	32.389	MGP_C57BL6NJ_G0027353	Zfp64	70	32.389
MGP_C57BL6NJ_G0033528	E430018J23Rik	61	44.498	MGP_C57BL6NJ_G0031136	Repin1	92	44.076
MGP_C57BL6NJ_G0033528	E430018J23Rik	86	35.381	MGP_C57BL6NJ_G0034637	Zfp1	98	35.381
MGP_C57BL6NJ_G0033528	E430018J23Rik	54	38.421	MGP_C57BL6NJ_G0019380	Zfp652	51	32.808
MGP_C57BL6NJ_G0033528	E430018J23Rik	58	42.177	MGP_C57BL6NJ_G0025014	Zfp236	58	42.177
MGP_C57BL6NJ_G0033528	E430018J23Rik	89	46.964	MGP_C57BL6NJ_G0032267	Zfp111	98	46.964
MGP_C57BL6NJ_G0033528	E430018J23Rik	87	44.000	MGP_C57BL6NJ_G0027315	Zfp334	99	44.000
MGP_C57BL6NJ_G0033528	E430018J23Rik	90	50.382	MGP_C57BL6NJ_G0022420	Zfp251	94	50.382
MGP_C57BL6NJ_G0033528	E430018J23Rik	89	47.895	MGP_C57BL6NJ_G0026884	Zfp661	94	42.286
MGP_C57BL6NJ_G0033528	E430018J23Rik	92	41.985	MGP_C57BL6NJ_G0023635	Zfp677	99	41.985
MGP_C57BL6NJ_G0033528	E430018J23Rik	91	45.763	MGP_C57BL6NJ_G0023637	Zfp51	95	45.763
MGP_C57BL6NJ_G0033528	E430018J23Rik	68	36.502	MGP_C57BL6NJ_G0030303	4930522L14Rik	99	36.502
MGP_C57BL6NJ_G0033528	E430018J23Rik	79	43.254	MGP_C57BL6NJ_G0023666	Zscan10	78	43.254
MGP_C57BL6NJ_G0033528	E430018J23Rik	85	46.119	MGP_C57BL6NJ_G0032271	Zfp94	96	46.119
MGP_C57BL6NJ_G0033528	E430018J23Rik	62	45.283	MGP_C57BL6NJ_G0034261	Zfp709	94	45.660
MGP_C57BL6NJ_G0033528	E430018J23Rik	69	36.765	MGP_C57BL6NJ_G0034479	Zfp319	93	39.245
MGP_C57BL6NJ_G0033528	E430018J23Rik	60	35.593	MGP_C57BL6NJ_G0032019	Zfp865	72	35.593
MGP_C57BL6NJ_G0033528	E430018J23Rik	60	48.421	MGP_C57BL6NJ_G0032011	Zfp628	60	47.264
MGP_C57BL6NJ_G0033528	E430018J23Rik	59	48.341	MGP_C57BL6NJ_G0032270	Zfp61	52	48.341
MGP_C57BL6NJ_G0033528	E430018J23Rik	67	47.967	MGP_C57BL6NJ_G0032439	Zfp420	98	47.967
MGP_C57BL6NJ_G0033528	E430018J23Rik	60	47.511	MGP_C57BL6NJ_G0033526	Zfp768	50	47.321
MGP_C57BL6NJ_G0033528	E430018J23Rik	81	69.915	MGP_C57BL6NJ_G0033529	Zfp747	84	69.915
MGP_C57BL6NJ_G0033528	E430018J23Rik	90	47.791	MGP_C57BL6NJ_G0021087	Rslcan18	82	47.791
MGP_C57BL6NJ_G0033528	E430018J23Rik	87	42.510	MGP_C57BL6NJ_G0021088	Zfp759	99	42.510
MGP_C57BL6NJ_G0033528	E430018J23Rik	79	45.070	MGP_C57BL6NJ_G0032591	Zfp715	74	45.070
MGP_C57BL6NJ_G0033528	E430018J23Rik	57	44.503	MGP_C57BL6NJ_G0031616	Zfp637	84	44.330
MGP_C57BL6NJ_G0033528	E430018J23Rik	86	41.045	MGP_C57BL6NJ_G0034971	Zfp872	99	40.755
MGP_C57BL6NJ_G0033528	E430018J23Rik	86	43.798	MGP_C57BL6NJ_G0034262	Zfp882	99	43.798
MGP_C57BL6NJ_G0033528	E430018J23Rik	86	39.583	MGP_C57BL6NJ_G0018791	Zfp867	95	39.583
MGP_C57BL6NJ_G0033528	E430018J23Rik	89	45.385	MGP_C57BL6NJ_G0018644	Zfp454	99	44.019