EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0033576 (Gene tree)
Gene ID: -
Gene Symbol: Tial1
Alias: 5330433G13Rik|AL033329|TIAR|mTIAR
Full Name: Tia1 cytotoxic granule-associated RNA binding protein-like 1
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 21915 bases
Position: chr7:138051393-138073307
Accession: 107913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0087559	RRM_1	PF00076.22	2.2e-63	1	3
MGP_C57BL6NJ_P0087559	RRM_1	PF00076.22	2.2e-63	2	3
MGP_C57BL6NJ_P0087559	RRM_1	PF00076.22	2.2e-63	3	3
MGP_C57BL6NJ_P0087562	RRM_1	PF00076.22	2.2e-63	1	3
MGP_C57BL6NJ_P0087562	RRM_1	PF00076.22	2.2e-63	2	3
MGP_C57BL6NJ_P0087562	RRM_1	PF00076.22	2.2e-63	3	3
MGP_C57BL6NJ_P0087556	RRM_1	PF00076.22	3.2e-60	1	3
MGP_C57BL6NJ_P0087556	RRM_1	PF00076.22	3.2e-60	2	3
MGP_C57BL6NJ_P0087556	RRM_1	PF00076.22	3.2e-60	3	3
MGP_C57BL6NJ_P0087558	RRM_1	PF00076.22	7.6e-51	1	3
MGP_C57BL6NJ_P0087558	RRM_1	PF00076.22	7.6e-51	2	3
MGP_C57BL6NJ_P0087558	RRM_1	PF00076.22	7.6e-51	3	3
MGP_C57BL6NJ_P0087564	RRM_1	PF00076.22	1.8e-26	1	2
MGP_C57BL6NJ_P0087564	RRM_1	PF00076.22	1.8e-26	2	2
MGP_C57BL6NJ_P0087561	RRM_1	PF00076.22	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0087568	-	1808	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087569	-	674	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087562	-	1580	-	MGP_C57BL6NJ_P0087562	375 (aa)	-	-
MGP_C57BL6NJ_T0087563	-	2319	-	MGP_C57BL6NJ_P0087563	135 (aa)	-	-
MGP_C57BL6NJ_T0087560	-	953	-	MGP_C57BL6NJ_P0087560	106 (aa)	-	-
MGP_C57BL6NJ_T0087561	-	562	-	MGP_C57BL6NJ_P0087561	107 (aa)	-	-
MGP_C57BL6NJ_T0087566	-	560	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087567	-	804	-	MGP_C57BL6NJ_P0087567	140 (aa)	-	-
MGP_C57BL6NJ_T0087564	-	1344	-	MGP_C57BL6NJ_P0087564	244 (aa)	-	-
MGP_C57BL6NJ_T0087565	-	784	-	MGP_C57BL6NJ_P0087565	41 (aa)	-	-
MGP_C57BL6NJ_T0087557	-	4258	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0087556	-	4443	XM_006507570	MGP_C57BL6NJ_P0087556	392 (aa)	XP_006507633	P70318
MGP_C57BL6NJ_T0087559	-	2033	-	MGP_C57BL6NJ_P0087559	375 (aa)	-	-
MGP_C57BL6NJ_T0087558	-	2835	-	MGP_C57BL6NJ_P0087558	336 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0033576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0033576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0033576	Tial1	94	31.783	MGP_C57BL6NJ_G0023550	Pabpc6	56	34.014
MGP_C57BL6NJ_G0033576	Tial1	67	30.769	MGP_C57BL6NJ_G0033826	Elavl1	95	30.769
MGP_C57BL6NJ_G0033576	Tial1	94	31.008	MGP_C57BL6NJ_G0022203	Pabpc1	56	34.783
MGP_C57BL6NJ_G0033576	Tial1	78	30.769	MGP_C57BL6NJ_G0029162	Pabpc4	57	30.201
MGP_C57BL6NJ_G0033576	Tial1	73	33.019	MGP_C57BL6NJ_G0029292	Trnau1ap	60	32.386
MGP_C57BL6NJ_G0033576	Tial1	72	34.615	MGP_C57BL6NJ_G0028865	Elavl2	93	34.615
MGP_C57BL6NJ_G0033576	Tial1	73	35.897	MGP_C57BL6NJ_G0028998	Elavl4	88	35.897
MGP_C57BL6NJ_G0033576	Tial1	73	32.000	MGP_C57BL6NJ_G0027748	Rbm46	52	30.000
MGP_C57BL6NJ_G0033576	Tial1	99	31.618	MGP_C57BL6NJ_G0027608	Pabpc4l	94	33.333
MGP_C57BL6NJ_G0033576	Tial1	64	31.461	MGP_C57BL6NJ_G0036247	Rbmx	90	32.258
MGP_C57BL6NJ_G0033576	Tial1	67	40.244	MGP_C57BL6NJ_G0017880	Cirbp	85	40.244
MGP_C57BL6NJ_G0033576	Tial1	53	32.143	MGP_C57BL6NJ_G0035394	Celf6	54	31.818
MGP_C57BL6NJ_G0033576	Tial1	81	31.111	MGP_C57BL6NJ_G0019862	Rbfox3	53	31.868
MGP_C57BL6NJ_G0033576	Tial1	92	32.500	MGP_C57BL6NJ_G0024778	Pabpc2	50	35.036
MGP_C57BL6NJ_G0033576	Tial1	81	37.333	MGP_C57BL6NJ_G0027972	Celf3	70	34.091
MGP_C57BL6NJ_G0033576	Tial1	73	37.179	MGP_C57BL6NJ_G0034964	Elavl3	91	37.179
MGP_C57BL6NJ_G0033576	Tial1	84	30.088	MGP_C57BL6NJ_G0025085	Rbm4b	92	30.345
MGP_C57BL6NJ_G0033576	Tial1	84	30.088	MGP_C57BL6NJ_G0025086	Rbm4	94	30.345
MGP_C57BL6NJ_G0033576	Tial1	94	31.579	MGP_C57BL6NJ_G0028476	-	58	30.114
MGP_C57BL6NJ_G0033576	Tial1	65	31.481	MGP_C57BL6NJ_G0025747	Celf2	61	34.177
MGP_C57BL6NJ_G0033576	Tial1	62	32.184	MGP_C57BL6NJ_G0023141	Ncbp2	71	33.333
MGP_C57BL6NJ_G0033576	Tial1	91	33.594	MGP_C57BL6NJ_G0028025	Sf3b4	57	36.719
MGP_C57BL6NJ_G0033576	Tial1	69	31.469	MGP_C57BL6NJ_G0030399	Msi1	56	41.379
MGP_C57BL6NJ_G0033576	Tial1	100	87.440	MGP_C57BL6NJ_G0031411	Tia1	97	86.992