EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0033980 (Gene tree)
Gene ID: -
Gene Symbol: Lsm1
Alias: 2810025O06Rik|CASM|U6 small nuclear RNA associated
Full Name: LSM1 homolog%2C mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Plus strand
Length: 19965 bases
Position: chr8:24822226-24842190
Accession: 1914457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0089033	LSM	PF01423.22	3.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0089033	-	2360	-	MGP_C57BL6NJ_P0089033	133 (aa)	-	Q8VC85

Gene Model

Click here to download MGP_C57BL6NJ_G0033980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0033980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0033980	Lsm1	65	34.091	MGP_C57BL6NJ_G0030914	Lsm8	92	34.091