EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034021 (Gene tree)
Gene ID: -
Gene Symbol: Rbpms
Alias: 2010300K22Rik|2700019M19Rik|AU017537|Hermes|RBP-MS|hermes
Full Name: RNA binding protein gene with multiple splicing
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 153488 bases
Position: chr8:33485951-33639438
Accession: 1334446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0089135	RRM_1	PF00076.22	1.4e-11	1	1
MGP_C57BL6NJ_P0089126	RRM_1	PF00076.22	2e-11	1	1
MGP_C57BL6NJ_P0089124	RRM_1	PF00076.22	2.1e-11	1	1
MGP_C57BL6NJ_P0089125	RRM_1	PF00076.22	2.1e-11	1	1
MGP_C57BL6NJ_P0089133	RRM_1	PF00076.22	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0089136	-	317	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089135	-	592	-	MGP_C57BL6NJ_P0089135	159 (aa)	-	-
MGP_C57BL6NJ_T0089131	-	643	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089124	-	2466	-	MGP_C57BL6NJ_P0089124	197 (aa)	-	Q9WVB0
MGP_C57BL6NJ_T0089125	-	2547	-	MGP_C57BL6NJ_P0089125	197 (aa)	-	-
MGP_C57BL6NJ_T0089126	-	2375	-	MGP_C57BL6NJ_P0089126	191 (aa)	-	-
MGP_C57BL6NJ_T0089127	-	1385	-	MGP_C57BL6NJ_P0089127	197 (aa)	-	-
MGP_C57BL6NJ_T0089128	-	865	-	MGP_C57BL6NJ_P0089128	93 (aa)	-	-
MGP_C57BL6NJ_T0089129	-	549	-	MGP_C57BL6NJ_P0089129	70 (aa)	-	-
MGP_C57BL6NJ_T0089130	-	405	-	MGP_C57BL6NJ_P0089130	57 (aa)	-	-
MGP_C57BL6NJ_T0089134	-	459	-	MGP_C57BL6NJ_P0089134	64 (aa)	-	-
MGP_C57BL6NJ_T0089133	-	1039	-	MGP_C57BL6NJ_P0089133	220 (aa)	-	-
MGP_C57BL6NJ_T0089132	-	525	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034021	Rbpms	87	78.417	MGP_C57BL6NJ_G0035456	Rbpms2	90	69.519