EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034045 (Gene tree)
Gene ID: -
Gene Symbol: Cnot7
Alias: AU022737|CAF-1|Caf1|Pop2
Full Name: CCR4-NOT transcription complex%2C subunit 7
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 24876 bases
Position: chr8:40819563-40844438
Accession: 1298230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0089194	CAF1	PF04857.20	3.5e-22	1	2
MGP_C57BL6NJ_P0089194	CAF1	PF04857.20	3.5e-22	2	2
MGP_C57BL6NJ_P0089195	CAF1	PF04857.20	3.5e-22	1	2
MGP_C57BL6NJ_P0089195	CAF1	PF04857.20	3.5e-22	2	2
MGP_C57BL6NJ_P0089198	CAF1	PF04857.20	3.5e-22	1	2
MGP_C57BL6NJ_P0089198	CAF1	PF04857.20	3.5e-22	2	2
MGP_C57BL6NJ_P0089197	CAF1	PF04857.20	6.1e-19	1	2
MGP_C57BL6NJ_P0089197	CAF1	PF04857.20	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0089200	-	840	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089203	-	726	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089202	-	312	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089205	-	406	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089204	-	484	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089193	-	2057	XM_006509306	MGP_C57BL6NJ_P0089193	179 (aa)	XP_006509369	Q60809
MGP_C57BL6NJ_T0089195	-	2542	-	MGP_C57BL6NJ_P0089195	285 (aa)	-	-
MGP_C57BL6NJ_T0089194	-	2615	-	MGP_C57BL6NJ_P0089194	285 (aa)	-	-
MGP_C57BL6NJ_T0089197	-	2461	-	MGP_C57BL6NJ_P0089197	248 (aa)	-	-
MGP_C57BL6NJ_T0089196	-	3876	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089199	-	679	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089198	-	2982	-	MGP_C57BL6NJ_P0089198	285 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034045	Cnot7	99	76.596	MGP_C57BL6NJ_G0018734	Cnot8	97	76.596