EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034195 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 10887 bases
Position: chr8:73226185-73237071
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0089719	ResIII	PF04851.15	4.2e-06	1	1
MGP_C57BL6NJ_P0089719	DEAD	PF00270.29	7.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0089719	-	2137	-	MGP_C57BL6NJ_P0089719	480 (aa)	-	Q4FZF3
MGP_C57BL6NJ_T0089722	-	1441	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089720	-	2163	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089721	-	599	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034195	Ddx49	76	32.609	MGP_C57BL6NJ_G0016945	Ddx59	58	32.609
MGP_C57BL6NJ_G0034195	Ddx49	91	45.824	MGP_C57BL6NJ_G0031854	Ddx47	95	45.824
MGP_C57BL6NJ_G0034195	Ddx49	80	32.673	MGP_C57BL6NJ_G0020986	Ddx41	62	32.921
MGP_C57BL6NJ_G0034195	Ddx49	79	32.190	MGP_C57BL6NJ_G0019870	Eif4a3	91	32.190
MGP_C57BL6NJ_G0034195	Ddx49	76	30.081	MGP_C57BL6NJ_G0019255	Ddx52	61	30.081
MGP_C57BL6NJ_G0034195	Ddx49	81	31.136	MGP_C57BL6NJ_G0025950	Ddx31	63	31.136
MGP_C57BL6NJ_G0034195	Ddx49	78	34.359	MGP_C57BL6NJ_G0019705	Ddx5	76	34.062
MGP_C57BL6NJ_G0034195	Ddx49	74	35.789	MGP_C57BL6NJ_G0036071	Ddx3x	55	35.789
MGP_C57BL6NJ_G0034195	Ddx49	74	33.708	MGP_C57BL6NJ_G0018937	Eif4a1	82	33.333
MGP_C57BL6NJ_G0034195	Ddx49	74	36.316	MGP_C57BL6NJ_G0017321	D1Pas1	55	36.316
MGP_C57BL6NJ_G0034195	Ddx49	94	33.623	MGP_C57BL6NJ_G0027329	Ddx27	59	33.696
MGP_C57BL6NJ_G0034195	Ddx49	78	33.156	MGP_C57BL6NJ_G0034335	Ddx39	87	33.156
MGP_C57BL6NJ_G0034195	Ddx49	70	33.333	MGP_C57BL6NJ_G0030529	Ddx55	56	33.333
MGP_C57BL6NJ_G0034195	Ddx49	74	34.048	MGP_C57BL6NJ_G0021324	Ddx4	52	33.687
MGP_C57BL6NJ_G0034195	Ddx49	72	40.909	MGP_C57BL6NJ_G0019996	Ddx1	63	40.909
MGP_C57BL6NJ_G0034195	Ddx49	83	30.573	MGP_C57BL6NJ_G0030320	Ddx51	71	30.573
MGP_C57BL6NJ_G0034195	Ddx49	71	31.649	MGP_C57BL6NJ_G0034568	Ddx28	68	31.649
MGP_C57BL6NJ_G0034195	Ddx49	67	30.960	MGP_C57BL6NJ_G0031330	Gm5580	81	30.960
MGP_C57BL6NJ_G0034195	Ddx49	67	30.960	MGP_C57BL6NJ_G0031331	Gm8994	81	30.960
MGP_C57BL6NJ_G0034195	Ddx49	78	32.891	MGP_C57BL6NJ_G0024038	Ddx39b	99	36.667
MGP_C57BL6NJ_G0034195	Ddx49	81	34.913	MGP_C57BL6NJ_G0035558	Ddx43	60	34.913
MGP_C57BL6NJ_G0034195	Ddx49	74	37.903	MGP_C57BL6NJ_G0022487	Ddx17	56	37.903
MGP_C57BL6NJ_G0034195	Ddx49	77	33.509	MGP_C57BL6NJ_G0016816	Ddx18	56	33.509