EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034205 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 2554 bases
Position: chr8:73456179-73458732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0089756	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089757	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089758	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089760	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089762	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089763	Ribosomal_L40e	PF01020.17	3.2e-21	1	1
MGP_C57BL6NJ_P0089764	Ribosomal_L40e	PF01020.17	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0089762	-	535	-	MGP_C57BL6NJ_P0089762	133 (aa)	-	-
MGP_C57BL6NJ_T0089763	-	402	-	MGP_C57BL6NJ_P0089763	133 (aa)	-	-
MGP_C57BL6NJ_T0089760	-	556	-	MGP_C57BL6NJ_P0089760	133 (aa)	-	-
MGP_C57BL6NJ_T0089764	-	611	-	MGP_C57BL6NJ_P0089764	96 (aa)	-	-
MGP_C57BL6NJ_T0089757	-	726	-	MGP_C57BL6NJ_P0089757	133 (aa)	-	-
MGP_C57BL6NJ_T0089756	-	720	-	MGP_C57BL6NJ_P0089756	133 (aa)	-	-
MGP_C57BL6NJ_T0089759	-	661	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0089758	-	712	-	MGP_C57BL6NJ_P0089758	133 (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034205	-	85	35.366	MGP_C57BL6NJ_G0025152	Gm9843	60	35.366
MGP_C57BL6NJ_G0034205	-	99	97.895	MGP_C57BL6NJ_G0034898	-	91	89.344
MGP_C57BL6NJ_G0034205	-	100	100.000	MGP_C57BL6NJ_G0034206	Kxd1	56	100.000