EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_C57BL6NJ_G0034304 (Gene tree)
Gene ID: -
Gene Symbol: Lsm6
Alias: 1500031N17Rik|2410088K19Rik|AI747288
Full Name: LSM6 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mus_musculus_c57bl6nj
Status: putative
Strand: Minus strand
Length: 24861 bases
Position: chr8:82489138-82513998
Accession: 1925901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_C57BL6NJ_P0090051	LSM	PF01423.22	2.4e-19	1	1
MGP_C57BL6NJ_P0090052	LSM	PF01423.22	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_C57BL6NJ_T0090052	-	2107	-	MGP_C57BL6NJ_P0090052	80 (aa)	-	-
MGP_C57BL6NJ_T0090053	-	473	-	-	- (aa)	-	-
MGP_C57BL6NJ_T0090051	-	3792	-	MGP_C57BL6NJ_P0090051	80 (aa)	-	P62313
MGP_C57BL6NJ_T0090054	-	541	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_C57BL6NJ_G0034304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_C57BL6NJ_G0034304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_C57BL6NJ_G0034304	Lsm6	83	51.515	MGP_C57BL6NJ_G0018053	Snrpf	77	51.515